WormBase Tree Display for Gene: WBGene00003753
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| WBGene00003753 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nlp-15 | Person_evidence | WBPerson242 | |||||
| Sequence_name | CC4.2 | ||||||||
| Molecular_name | CC4.2 | ||||||||
| CC4.2.1 | |||||||||
| CE36118 | |||||||||
| Other_name | CELE_CC4.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | nlp-15 | ||||||||
| DB_info | Database | AceView | gene | 1N587 | |||||
| WormQTL | gene | WBGene00003753 | |||||||
| WormFlux | gene | WBGene00003753 | |||||||
| NDB | locus_tag | CELE_CC4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003753|UniProtKB=G5EGN6 | |||||||
| family | PTHR33864 | ||||||||
| NCBI | gene | 173174 | |||||||
| RefSeq | protein | NM_060877.8 | |||||||
| TREEFAM | TREEFAM_ID | TF320874 | |||||||
| TrEMBL | UniProtAcc | G5EGN6 | |||||||
| UniProt_GCRP | UniProtAcc | G5EGN6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nlp | ||||||||
| Allele (157) | |||||||||
| Strain | WBStrain00036292 | ||||||||
| WBStrain00055187 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00020584 | ||||||||
| 00111781 | |||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00003752 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable neuropeptide hormone activity. Predicted to be involved in neuropeptide signaling pathway. Expressed in several structures, including XXX cell; intestine; neurons; pharynx; and vulva. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | CC4.2 | |||||||
| Corresponding_CDS_history | CC4.2:wp114 | ||||||||
| Corresponding_transcript | CC4.2.1 | ||||||||
| Other_sequence (60) | |||||||||
| Associated_feature | WBsf643785 | ||||||||
| WBsf985746 | |||||||||
| WBsf985747 | |||||||||
| WBsf985748 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003249 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030289 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043297 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101916 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00010035 | ||||||||
| WBCnstr00010402 | |||||||||
| WBCnstr00012278 | |||||||||
| WBCnstr00015060 | |||||||||
| WBCnstr00016258 | |||||||||
| WBCnstr00035891 | |||||||||
| WBCnstr00042156 | |||||||||
| WBCnstr00042598 | |||||||||
| Construct_product | WBCnstr00010035 | ||||||||
| WBCnstr00035891 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (220) | |||||||||
| Interaction (87) | |||||||||
| Map_info | Map | I | Position | 16.8189 | Error | 0.007001 | |||
| Positive | Positive_clone | CC4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5586 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003915 | ||||||||
| WBPaper00004975 | |||||||||
| WBPaper00024232 | |||||||||
| WBPaper00025141 | |||||||||
| WBPaper00026655 | |||||||||
| WBPaper00026994 | |||||||||
| WBPaper00030763 | |||||||||
| WBPaper00033725 | |||||||||
| WBPaper00037241 | |||||||||
| WBPaper00043908 | |||||||||
| WBPaper00046959 | |||||||||
| WBPaper00052580 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
