WormBase Tree Display for Gene: WBGene00003720
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| WBGene00003720 | SMap | S_parent | Sequence | T01G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-130 | Person_evidence | WBPerson600 | |||||
| Sequence_name | T01G6.8 | ||||||||
| Molecular_name | T01G6.8 | ||||||||
| T01G6.8.1 | |||||||||
| CE18167 | |||||||||
| Other_name | CELE_T01G6.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-130 | ||||||||
| DB_info | Database | AceView | gene | 5A958 | |||||
| WormQTL | gene | WBGene00003720 | |||||||
| WormFlux | gene | WBGene00003720 | |||||||
| NDB | locus_tag | CELE_T01G6.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003720|UniProtKB=O16963 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 187965 | |||||||
| RefSeq | protein | NM_070815.7 | |||||||
| SwissProt | UniProtAcc | O16963 | |||||||
| TREEFAM | TREEFAM_ID | TF315604 | |||||||
| UniProt_GCRP | UniProtAcc | O16963 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (138) | |||||||||
| Strain | WBStrain00036639 | ||||||||
| WBStrain00036660 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029043 | ||||||||
| 00029044 | |||||||||
| 00029045 | |||||||||
| 00029046 | |||||||||
| 00111677 | |||||||||
| 00111678 | |||||||||
| 00111679 | |||||||||
| 00111680 | |||||||||
| Ortholog (54) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T01G6.8 | |||||||
| Corresponding_transcript | T01G6.8.1 | ||||||||
| Other_sequence | FD514796.1 | ||||||||
| CJC14253_1 | |||||||||
| CSC00161_1 | |||||||||
| Associated_feature | WBsf978899 | ||||||||
| WBsf999168 | |||||||||
| WBsf999169 | |||||||||
| WBsf999170 | |||||||||
| WBsf1019079 | |||||||||
| WBsf233269 | |||||||||
| WBsf233270 | |||||||||
| Transcription_factor | WBTranscriptionFactor000595 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052155 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017991 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035029 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012446 | ||||||||
| Expr1031733 | |||||||||
| Expr1155790 | |||||||||
| Expr2014030 | |||||||||
| Expr2032270 | |||||||||
| Drives_construct | WBCnstr00035920 | ||||||||
| Construct_product | WBCnstr00018627 | ||||||||
| WBCnstr00035920 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction (37) | |||||||||
| Map_info | Map | V | Position | -19.989 | |||||
| Positive | Positive_clone | T01G6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
