WormBase Tree Display for Gene: WBGene00003681

WBGene00003681 SMap: S_parent: Sequence: Y15E3A
  Identity: Version: 1
    Name: CGC_name: nhr-91 Person_evidence: WBPerson600
      Sequence_name: Y15E3A.1
      Molecular_name: Y15E3A.1a
        Y15E3A.1a.1
        CE27779
        Y15E3A.1b
        CE38001
        Y15E3A.1a.2
        Y15E3A.1a.3
        Y15E3A.1a.4
        Y15E3A.1b.1
        Y15E3A.1b.2
      Other_name: CELE_Y15E3A.1 Accession_evidence: NDB BX284606
      Public_name: nhr-91
    DB_info: Database: AceView gene XP933
        WormQTL gene WBGene00003681
        WormFlux gene WBGene00003681
        NDB locus_tag CELE_Y15E3A.1
        Panther gene CAEEL|WormBase=WBGene00003681|UniProtKB=Q9U2R6
          family PTHR24083
        NCBI gene 181621
        RefSeq protein NM_001392897.1
            NM_001029782.6
        SwissProt UniProtAcc Q9U2R6
        TREEFAM TREEFAM_ID TF350737
        UniProt_GCRP UniProtAcc Q9U2R6
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (95)
    RNASeq_FPKM (74)
    GO_annotation (19)
    Ortholog: WBGene00058628 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029650 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00148427 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00134794 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00096517 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00226556 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2410 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12043 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17752 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20894 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23138 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24907 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13160 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13941 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9032 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8829 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00026.g1570 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-nhr-91 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00376.g10386 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_01815.g23308 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01766 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025562 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01416 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9172 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0135100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20733 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239805 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00256048 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293943 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0264562 Drosophila melanogaster From_analysis: OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-991207-19 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
      ZFIN:ZDB-GENE-040724-202 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
      HGNC:7985 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
      MGI:1352459 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            SonicParanoid
      RGD:1564740 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
    Paralog (42)
    Structured_description (2)
  Molecular_info: Corresponding_CDS: Y15E3A.1a
      Y15E3A.1b
    Corresponding_CDS_history: Y15E3A.1:wp51
      Y15E3A.1:wp138
    Corresponding_transcript: Y15E3A.1a.1
      Y15E3A.1a.2
      Y15E3A.1a.3
      Y15E3A.1a.4
      Y15E3A.1b.1
      Y15E3A.1b.2
    Other_sequence: ES566927.1
      EX499800.1
      TSC10314_1
      JI168333.1
      MH04569
      MHC02010_1
      TSC13709_1
    Associated_feature (24)
    Transcription_factor: WBTranscriptionFactor000197
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr2868
      Expr1012698
      Expr1031711
      Expr1159050
      Expr2014243
      Expr2032484
    Drives_construct: WBCnstr00010998
      WBCnstr00017594
      WBCnstr00017984
      WBCnstr00035950
    Construct_product: WBCnstr00035950
    Microarray_results (29)
    Expression_cluster (162)
    Interaction (76)
  Map_info: Map: X Position: 22.4209 Error: 0.024648
    Positive: Positive_clone: Y15E3A Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (11)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene