WormBase Tree Display for Gene: WBGene00003668
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| WBGene00003668 | Evidence | Paper_evidence | WBPaper00003754 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F36A4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-78 | Person_evidence | WBPerson573 | |||||
| Sequence_name | F36A4.14 | ||||||||
| Molecular_name | F36A4.14 | ||||||||
| F36A4.14.1 | |||||||||
| CE44742 | |||||||||
| Other_name | CELE_F36A4.14 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | nhr-78 | ||||||||
| DB_info | Database | AceView | gene | 4F40 | |||||
| WormQTL | gene | WBGene00003668 | |||||||
| WormFlux | gene | WBGene00003668 | |||||||
| NDB | locus_tag | CELE_F36A4.14 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003668|UniProtKB=Q20097 | |||||||
| family | PTHR46011 | ||||||||
| NCBI | gene | 191727 | |||||||
| RefSeq | protein | NM_068129.3 | |||||||
| TREEFAM | TREEFAM_ID | TF321941 | |||||||
| TrEMBL | UniProtAcc | Q20097 | |||||||
| UniProt_GCRP | UniProtAcc | Q20097 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Laboratory | PY | ||||||||
| Allele (89) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067143 | ||||||||
| 00067144 | |||||||||
| 00067145 | |||||||||
| 00067146 | |||||||||
| 00067147 | |||||||||
| 00111473 | |||||||||
| 00111474 | |||||||||
| 00111475 | |||||||||
| 00111476 | |||||||||
| Ortholog (28) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F36A4.14 | |||||||
| Corresponding_CDS_history | F36A4.14:wp213 | ||||||||
| Corresponding_transcript | F36A4.14.1 | ||||||||
| Associated_feature | WBsf651725 | ||||||||
| WBsf667873 | |||||||||
| WBsf978822 | |||||||||
| WBsf996231 | |||||||||
| Transcription_factor | WBTranscriptionFactor000255 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00014393 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046453 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1186 | ||||||||
| Expr1014798 | |||||||||
| Expr1031703 | |||||||||
| Expr1150322 | |||||||||
| Expr2014229 | |||||||||
| Expr2032470 | |||||||||
| Drives_construct | WBCnstr00010138 | ||||||||
| Construct_product | WBCnstr00010138 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (59) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | IV | Position | 0.084725 | Error | 0.010043 | |||
| Positive | Positive_clone | F36A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | .12 gene changed to .14, by agreement with john spieth. [sdm 05/00] | ||||||||
| confirmed by Ann Sluder 05/00. | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
