WormBase Tree Display for Gene: WBGene00003658
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WBGene00003658 | SMap | S_parent | Sequence | H12C20 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | nhr-68 | Person_evidence | WBPerson600 | |||||
Sequence_name | H12C20.3 | ||||||||
Molecular_name | H12C20.3a | ||||||||
H12C20.3a.1 | |||||||||
CE18808 | |||||||||
H12C20.3b | |||||||||
CE47189 | |||||||||
H12C20.3b.1 | |||||||||
Other_name | CELE_H12C20.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-68 | ||||||||
DB_info | Database | AceView | gene | 5M55 | |||||
WormQTL | gene | WBGene00003658 | |||||||
WormFlux | gene | WBGene00003658 | |||||||
NDB | locus_tag | CELE_H12C20.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003658|UniProtKB=Q9XXM8 | |||||||
family | PTHR24083 | ||||||||
NCBI | gene | 179589 | |||||||
RefSeq | protein | NM_001380769.3 | |||||||
NM_001380770.1 | |||||||||
SwissProt | UniProtAcc | Q9XXM8 | |||||||
TrEMBL | UniProtAcc | H8ESE6 | |||||||
UniProt_GCRP | UniProtAcc | Q9XXM8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (37) | |||||||||
Strain | WBStrain00036665 | ||||||||
WBStrain00036726 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (18) | |||||||||
Ortholog (26) | |||||||||
Paralog (216) | |||||||||
Structured_description | Automated_description | Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in regulation of transcription by RNA polymerase II. Part of chromatin. Expressed in head muscle and head neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | H12C20.3a | |||||||
H12C20.3b | |||||||||
Corresponding_transcript | H12C20.3a.1 | ||||||||
H12C20.3b.1 | |||||||||
Other_sequence | FD514463.1 | ||||||||
FD515477.1 | |||||||||
FD514165.1 | |||||||||
CBC10258_1 | |||||||||
CSC00785_1 | |||||||||
Associated_feature | WBsf647277 | ||||||||
WBsf647278 | |||||||||
WBsf661751 | |||||||||
WBsf978297 | |||||||||
WBsf232522 | |||||||||
WBsf232523 | |||||||||
WBsf232524 | |||||||||
Transcription_factor | WBTranscriptionFactor000706 | ||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern (12) | |||||||||
Drives_construct | WBCnstr00012742 | ||||||||
WBCnstr00015294 | |||||||||
WBCnstr00015295 | |||||||||
WBCnstr00015296 | |||||||||
WBCnstr00035965 | |||||||||
Construct_product | WBCnstr00035965 | ||||||||
Microarray_results (24) | |||||||||
Expression_cluster (212) | |||||||||
Interaction (15) | |||||||||
Map_info | Map | V | Position | 3.20786 | Error | 0.000254 | |||
Positive | Positive_clone | H12C20 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (17) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |