WormBase Tree Display for Gene: WBGene00003653
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| WBGene00003653 | Evidence | Paper_evidence | WBPaper00003416 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C06C6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-63 | Person_evidence | WBPerson600 | |||||
| Sequence_name | C06C6.4 | ||||||||
| Molecular_name | C06C6.4 | ||||||||
| C06C6.4.1 | |||||||||
| CE28202 | |||||||||
| Other_name | CELE_C06C6.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-63 | ||||||||
| DB_info | Database | AceView | gene | 5Q483 | |||||
| WormQTL | gene | WBGene00003653 | |||||||
| WormFlux | gene | WBGene00003653 | |||||||
| NDB | locus_tag | CELE_C06C6.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003653|UniProtKB=O62034 | |||||||
| family | PTHR46800 | ||||||||
| NCBI | gene | 180068 | |||||||
| RefSeq | protein | NM_171557.5 | |||||||
| TREEFAM | TREEFAM_ID | TF319262 | |||||||
| TrEMBL | UniProtAcc | O62034 | |||||||
| UniProt_GCRP | UniProtAcc | O62034 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (103) | |||||||||
| Strain | WBStrain00035337 | ||||||||
| WBStrain00035338 | |||||||||
| WBStrain00030204 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036846 | ||||||||
| 00036847 | |||||||||
| 00036848 | |||||||||
| 00036849 | |||||||||
| 00111418 | |||||||||
| 00111419 | |||||||||
| 00111420 | |||||||||
| 00111421 | |||||||||
| Ortholog (20) | |||||||||
| Paralog (216) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in metacorpus; procorpus; terminal bulb; and vulva. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06C6.4 | |||||||
| Corresponding_CDS_history | C06C6.4:wp52 | ||||||||
| Corresponding_transcript | C06C6.4.1 | ||||||||
| Associated_feature | WBsf233061 | ||||||||
| Transcription_factor | WBTranscriptionFactor000261 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00010295 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028566 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039875 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram165 | ||||||||
| Chronogram1114 | |||||||||
| Expr7416 | |||||||||
| Expr1020836 | |||||||||
| Expr1031694 | |||||||||
| Expr1143960 | |||||||||
| Expr2014214 | |||||||||
| Expr2032455 | |||||||||
| Drives_construct | WBCnstr00001147 | ||||||||
| WBCnstr00001148 | |||||||||
| WBCnstr00012559 | |||||||||
| WBCnstr00035968 | |||||||||
| Construct_product | WBCnstr00035968 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (180) | |||||||||
| Map_info | Map | V | Position | 9.31396 | Error | 0.003349 | |||
| Positive | Positive_clone | C06C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4525 | |||||||
| 5313 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005859 | ||||||||
| WBPaper00026592 | |||||||||
| WBPaper00027309 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
