WormBase Tree Display for Gene: WBGene00003618
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| WBGene00003618 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-19 | Person_evidence | WBPerson600 | |||||
| Sequence_name | E02H1.7 | ||||||||
| Molecular_name | E02H1.7 | ||||||||
| E02H1.7.1 | |||||||||
| CE30271 | |||||||||
| E02H1.7.2 | |||||||||
| Other_name | CELE_E02H1.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | nhr-19 | ||||||||
| DB_info | Database | AceView | gene | 2J890 | |||||
| WormQTL | gene | WBGene00003618 | |||||||
| WormFlux | gene | WBGene00003618 | |||||||
| NDB | locus_tag | CELE_E02H1.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003618|UniProtKB=Q09528 | |||||||
| family | PTHR46587 | ||||||||
| NCBI | gene | 174512 | |||||||
| RefSeq | protein | NM_063665.7 | |||||||
| SwissProt | UniProtAcc | Q09528 | |||||||
| TREEFAM | TREEFAM_ID | TF317146 | |||||||
| UniProt_GCRP | UniProtAcc | Q09528 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (105) | |||||||||
| Legacy_information | NMK. Nuclear hormone receptor superfamily. [AE] | ||||||||
| [C.elegansII] NMK. Nuclear hormone receptor superfamily. Sequenced: E02H1.7[AE] | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | E02H1.7 | |||||||
| Corresponding_CDS_history | E02H1.7:wp72 | ||||||||
| Corresponding_transcript | E02H1.7.1 | ||||||||
| E02H1.7.2 | |||||||||
| Other_sequence (32) | |||||||||
| Associated_feature (15) | |||||||||
| Transcription_factor | WBTranscriptionFactor000386 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00030469 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012647 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043603 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025615 | ||||||||
| Expr1031664 | |||||||||
| Expr1147593 | |||||||||
| Expr2014102 | |||||||||
| Expr2032341 | |||||||||
| Drives_construct | WBCnstr00035996 | ||||||||
| Construct_product | WBCnstr00035996 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (23) | |||||||||
| Map_info | Map | II | Position | 1.61621 | Error | 0.000168 | |||
| Positive | Positive_clone | E02H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4591 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00015440 | ||||||||
| WBPaper00027309 | |||||||||
| Remark | Map II Position 1.590000 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
