WormBase Tree Display for Gene: WBGene00003615
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WBGene00003615 | Evidence | Paper_evidence | WBPaper00003416 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T12C9 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nhr | ||||||
Allele (37) | |||||||
Strain | WBStrain00036513 | ||||||
WBStrain00036514 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (69) | |||||||
Paralog (218) | |||||||
Structured_description | Concise_description | nhr-16 encodes a member of the superfamily of nuclear receptors, which is one of the most abundant class of transcriptional regulators; nuclear receptors have a well conserved DNA binding domain and a less conserved C-terminal ligand binding domain. | Paper_evidence | WBPaper00003416 | |||
WBPaper00003754 | |||||||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 16 Nov 2005 00:00:00 | ||||||
Automated_description | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T12C9.6 | |||||
Corresponding_transcript | T12C9.6.1 | ||||||
Associated_feature | WBsf987600 | ||||||
WBsf1012087 | |||||||
WBsf221128 | |||||||
Transcription_factor | WBTranscriptionFactor000602 | ||||||
Experimental_info | RNAi_result | WBRNAi00053198 | Inferred_automatically | RNAi_primary | |||
WBRNAi00027859 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1013086 | ||||||
Expr1156788 | |||||||
Expr2014070 | |||||||
Expr2032310 | |||||||
Microarray_results (19) | |||||||
Expression_cluster (79) | |||||||
Interaction (11) | |||||||
Map_info | Map | II | Position | -4.40014 | Error | 0.008982 | |
Positive | Positive_clone | T12C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00003754 | ||||||
WBPaper00027309 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |