WormBase Tree Display for Gene: WBGene00003614
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| WBGene00003614 | Evidence | Paper_evidence | WBPaper00003416 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F33E11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-15 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F33E11.1 | ||||||||
| Molecular_name | F33E11.1a | ||||||||
| F33E11.1a.1 | |||||||||
| CE17759 | |||||||||
| F33E11.1a.2 | |||||||||
| F33E11.1b | |||||||||
| Other_name | CELE_F33E11.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-15 | ||||||||
| DB_info | Database | AceView | gene | 5A799 | |||||
| WormQTL | gene | WBGene00003614 | |||||||
| WormFlux | gene | WBGene00003614 | |||||||
| NDB | locus_tag | CELE_F33E11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003614|UniProtKB=O61854 | |||||||
| family | PTHR45886 | ||||||||
| NCBI | gene | 178558 | |||||||
| RefSeq | protein | NR_132474.1 | |||||||
| NM_001392465.1 | |||||||||
| TrEMBL | UniProtAcc | O61854 | |||||||
| UniProt_GCRP | UniProtAcc | O61854 | |||||||
| RNAcentral | URSid | URS000084FB66 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (214) | |||||||||
| Strain | WBStrain00036716 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036496 | ||||||||
| 00036497 | |||||||||
| 00036498 | |||||||||
| 00036499 | |||||||||
| 00111258 | |||||||||
| 00111259 | |||||||||
| 00111260 | |||||||||
| 00111261 | |||||||||
| Ortholog (21) | |||||||||
| Paralog (222) | |||||||||
| Structured_description | Concise_description | nhr-15 is predicted to encode a member of the nuclear hormone receptor family. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 16 Feb 2005 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in head muscle and pharynx. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F33E11.1a | |||||||
| Corresponding_transcript | F33E11.1b | ||||||||
| F33E11.1a.1 | |||||||||
| F33E11.1a.2 | |||||||||
| Other_sequence | OVC02229_1 | ||||||||
| AI322082.1 | |||||||||
| Associated_feature (12) | |||||||||
| Transcription_factor | WBTranscriptionFactor000562 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00014248 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046210 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031720 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116274 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116275 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7536 | ||||||||
| Expr1015344 | |||||||||
| Expr1031661 | |||||||||
| Expr1150097 | |||||||||
| Expr2014060 | |||||||||
| Expr2032300 | |||||||||
| Drives_construct | WBCnstr00012681 | ||||||||
| WBCnstr00035999 | |||||||||
| Construct_product | WBCnstr00035999 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (118) | |||||||||
| Map_info | Map | V | Position | -20.004 | |||||
| Positive | Positive_clone | F33E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5578 | |||||||
| 4135 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
