WormBase Tree Display for Gene: WBGene00003549
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| WBGene00003549 | Evidence | Author_evidence | Moehrlen F | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F58B4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nas-31 | Person_evidence | WBPerson1103 | |||||
| Sequence_name | F58B4.1 | ||||||||
| Molecular_name | F58B4.1a | ||||||||
| F58B4.1a.1 | |||||||||
| CE35881 | |||||||||
| F58B4.1b | |||||||||
| CE35882 | |||||||||
| F58B4.1b.1 | |||||||||
| Other_name | CELE_F58B4.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nas-31 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nas | ||||||||
| Allele (44) | |||||||||
| Strain | WBStrain00002648 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (26) | |||||||||
| Paralog (48) | |||||||||
| Structured_description | Concise_description | nas-31 encodes an astacin family zinc metalloprotease with a single SXC/ShK toxin domain in addition to the EGF and CUB domains; nas-31 is expressed in the anal depressor, intestinal, and vulval muscles and head neurons. | Paper_evidence | WBPaper00035910 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 25 Oct 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in molting cycle and proteolysis. Predicted to be located in extracellular region. Expressed in AMshL; AMshR; PHshL; PHshR; and head. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58B4.1a | |||||||
| F58B4.1b | |||||||||
| Corresponding_CDS_history | F58B4.1:wp111 | ||||||||
| Corresponding_transcript | F58B4.1a.1 | ||||||||
| F58B4.1b.1 | |||||||||
| Other_sequence (148) | |||||||||
| Associated_feature | WBsf653045 | ||||||||
| WBsf669345 | |||||||||
| WBsf234467 | |||||||||
| WBsf234468 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048956 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015945 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033077 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089094 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6250 | ||||||||
| Expr8927 | |||||||||
| Expr1025804 | |||||||||
| Expr1152693 | |||||||||
| Expr2013879 | |||||||||
| Expr2032119 | |||||||||
| Drives_construct | WBCnstr00003194 | ||||||||
| WBCnstr00013622 | |||||||||
| WBCnstr00036052 | |||||||||
| Construct_product | WBCnstr00013622 | ||||||||
| WBCnstr00036052 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (66) | |||||||||
| Map_info | Map | V | Position | 2.83133 | Error | 0.000716 | |||
| Positive | Positive_clone | F58B4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006254 | ||||||||
| WBPaper00026805 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
