WormBase Tree Display for Gene: WBGene00003546
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| WBGene00003546 | Evidence | Author_evidence | Moehrlen F | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F42A10 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nas-28 | Person_evidence | WBPerson1103 | |||||
| Sequence_name | F42A10.8 | ||||||||
| Molecular_name | F42A10.8 | ||||||||
| F42A10.8.1 | |||||||||
| CE38958 | |||||||||
| Other_name | CELE_F42A10.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | nas-28 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nas | ||||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP3826 | ||||||||
| Ortholog (24) | |||||||||
| Paralog (48) | |||||||||
| Structured_description | Concise_description | nas-28 encodes an astacin family zinc metalloprotease; nas-28 is expressed in the pharynx, intestine and coelomocytes. | Paper_evidence | WBPaper00035910 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 25 Oct 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in molting cycle and proteolysis. Predicted to be located in extracellular region. Expressed in coelomocyte; intestine; and pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F42A10.8 | |||||||
| Corresponding_CDS_history | F42A10.8:wp112 | ||||||||
| F42A10.8:wp146 | |||||||||
| Corresponding_transcript | F42A10.8.1 | ||||||||
| Other_sequence | Hbac_isotig02296 | ||||||||
| Oden_isotig22008 | |||||||||
| Associated_feature | WBsf992670 | ||||||||
| WBsf992671 | |||||||||
| WBsf992672 | |||||||||
| WBsf992673 | |||||||||
| WBsf1015046 | |||||||||
| WBsf1015047 | |||||||||
| WBsf1015048 | |||||||||
| WBsf226777 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00089079 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005362 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014796 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047062 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032121 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8925 | ||||||||
| Expr1020332 | |||||||||
| Expr1031617 | |||||||||
| Expr1150924 | |||||||||
| Expr2013876 | |||||||||
| Expr2032116 | |||||||||
| Drives_construct | WBCnstr00013620 | ||||||||
| WBCnstr00036054 | |||||||||
| Construct_product | WBCnstr00013620 | ||||||||
| WBCnstr00036054 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (125) | |||||||||
| Map_info | Map | III | Position | -1.4097 | Error | 0.000265 | |||
| Positive | Positive_clone | F42A10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006254 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
