WormBase Tree Display for Gene: WBGene00003309
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| WBGene00003309 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T07D1 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-81 | Person_evidence | WBPerson18 | |||||
| Sequence_name | T07D1.6 | ||||||||
| Molecular_name | T07D1.6 | ||||||||
| T07D1.6a | |||||||||
| T07D1.6b | |||||||||
| Other_name | cel-mir-81 | Remark | miRBase V21 import | ||||||
| Cel-Bantam-P3 | Remark | MirGeneDB 2.1 import | |||||||
| CELE_T07D1.6 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | mir-81 | ||||||||
| DB_info | Database | miRBase | acc | MI0000052 | |||||
| SignaLink | mirna | cel-mir-81 | |||||||
| MirGeneDB | cel | Cel-Bantam-P3 | |||||||
| NDB | locus_tag | CELE_T07D1.6 | |||||||
| NCBI | gene | 259789 | |||||||
| RefSeq | protein | NR_001270.2 | |||||||
| RNAcentral | URSid | URS000008D2C7 | |||||||
| URS0000235C74 | |||||||||
| URS0000490F7A | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar00496762 | ||||||||
| WBVar01499636 | |||||||||
| WBVar00323162 | |||||||||
| WBVar02151212 | |||||||||
| WBVar02151776 | |||||||||
| WBVar01126682 | |||||||||
| Strain | WBStrain00027445 | ||||||||
| WBStrain00007203 | |||||||||
| WBStrain00007204 | |||||||||
| WBStrain00007205 | |||||||||
| WBStrain00007206 | |||||||||
| WBStrain00051622 | |||||||||
| In_cluster | BANTAM | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-81 encodes a member of an extensive class of microRNAs and is most abundantly expressed in the L1 stage of larval development. | Paper_evidence | WBPaper00004927 | |||||
| WBPaper00004928 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 16 Nov 2004 00:00:00 | ||||||||
| Automated_description | Is affected by several genes including eat-2; alg-1; and alg-2 based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | T07D1.6 | |||||||
| T07D1.6a | |||||||||
| T07D1.6b | |||||||||
| Associated_feature | WBsf979141 | ||||||||
| Gene_product_binds | WBsf977969 | ||||||||
| WBsf977970 | |||||||||
| WBsf977971 | |||||||||
| WBsf977972 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035298 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr2499 | ||||||||
| Expr8476 | |||||||||
| Expr10929 | |||||||||
| Drives_construct | WBCnstr00005537 | ||||||||
| Expression_cluster (20) | |||||||||
| Interaction | WBInteraction000525170 | ||||||||
| WBInteraction000542241 | |||||||||
| WBInteraction000542246 | |||||||||
| WBInteraction000542495 | |||||||||
| WBInteraction000544769 | |||||||||
| WBInteraction000549481 | |||||||||
| WBInteraction000549484 | |||||||||
| WBInteraction000549485 | |||||||||
| WBInteraction000549486 | |||||||||
| WBInteraction000549487 | |||||||||
| Map_info | Positive | Inside_rearr | nDf54 | ||||||
| Positive_clone | T07D1 | Inferred_automatically | From CDS info | ||||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Pos_neg_data | 10924 | |||||||
| Interpolated_map_position | X | -15.4888 | |||||||
| Reference (13) | |||||||||
| Method | Gene |
