WormBase Tree Display for Gene: WBGene00003307
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| WBGene00003307 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C12C8 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-79 | Person_evidence | WBPerson18 | |||||
| Sequence_name | C12C8.4 | ||||||||
| Molecular_name | C12C8.4 | ||||||||
| C12C8.4a | |||||||||
| C12C8.4b | |||||||||
| Other_name | cel-mir-79 | Remark | miRBase V21 import | ||||||
| Cel-Mir-9-P18 | Remark | MirGeneDB 2.1 import | |||||||
| CELE_C12C8.4 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | mir-79 | ||||||||
| DB_info | Database | miRBase | acc | MI0000050 | |||||
| SignaLink | mirna | cel-mir-79 | |||||||
| MirGeneDB | cel | Cel-Mir-9-P18 | |||||||
| NDB | locus_tag | CELE_C12C8.4 | |||||||
| NCBI | gene | 259856 | |||||||
| RefSeq | protein | NR_000169.2 | |||||||
| RNAcentral | URSid | URS0000240AA6 | |||||||
| URS00002F68B9 | |||||||||
| URS0000482B26 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01500105 | ||||||||
| WBVar01499739 | |||||||||
| WBVar00660255 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01499054 | |||||||||
| WBVar00090808 | |||||||||
| WBVar01498959 | |||||||||
| Strain | WBStrain00027447 | ||||||||
| WBStrain00027459 | |||||||||
| In_cluster | MIR-9 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-79 encodes a microRNA, a small non-protein coding RNA and is conserved in C. briggsae; mir-79 is strongly expressed at all developmental stages in normal worms and in glp-4(bn2) mutant worms; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-79 is unknown. | Paper_evidence | WBPaper00004927 | |||||
| WBPaper00005825 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 08 Feb 2005 00:00:00 | ||||||||
| Automated_description | Expressed in hypodermis. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | C12C8.4 | |||||||
| C12C8.4a | |||||||||
| C12C8.4b | |||||||||
| Other_sequence | AJ487602 | ||||||||
| Associated_feature | WBsf979091 | ||||||||
| WBsf984652 | |||||||||
| Experimental_info | Expr_pattern | Expr2497 | |||||||
| Expr8473 | |||||||||
| Expr10918 | |||||||||
| Expr11269 | |||||||||
| Drives_construct | WBCnstr00005503 | ||||||||
| WBCnstr00016910 | |||||||||
| WBCnstr00018527 | |||||||||
| Expression_cluster (28) | |||||||||
| Interaction | WBInteraction000520689 | ||||||||
| WBInteraction000520690 | |||||||||
| Map_info | Map | I | Position | 3.74935 | Error | 0.001346 | |||
| Positive | Positive_clone | C12C8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
