WormBase Tree Display for Gene: WBGene00003304
expand all nodes | collapse all nodes | view schema
| WBGene00003304 | Evidence | Paper_evidence | WBPaper00004928 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C44B11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mir-76 | Person_evidence | WBPerson18 | |||||
| Sequence_name | C44B11.5 | ||||||||
| Molecular_name | C44B11.5 | ||||||||
| C44B11.5a | |||||||||
| C44B11.5b | |||||||||
| Other_name | cel-mir-76 | Remark | miRBase V21 import | ||||||
| MirGeneDB 2.1 import | |||||||||
| CELE_C44B11.5 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | mir-76 | ||||||||
| DB_info | Database | miRBase | acc | MI0000047 | |||||
| SignaLink | mirna | cel-mir-76 | |||||||
| MirGeneDB | cel | Cel-Mir-76 | |||||||
| NDB | locus_tag | CELE_C44B11.5 | |||||||
| NCBI | gene | 260081 | |||||||
| RefSeq | protein | NR_000276.2 | |||||||
| RNAcentral | URSid | URS0000070703 | |||||||
| URS000016F6D7 | |||||||||
| URS0000448853 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele | WBVar01500082 | ||||||||
| WBVar00090845 | |||||||||
| WBVar00814064 | |||||||||
| WBVar01498832 | |||||||||
| WBVar01329789 | |||||||||
| Strain | WBStrain00027462 | ||||||||
| In_cluster | MIR-76 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | mir-76 encodes a microRNA, a small non-protein coding RNA and has a potential ortholog in C. briggsae; based on RNA sequence the mir-76 family consists of miR-76 and human miR-187; many of the known microRNAs are involved in post-transcriptional regulation of genes; the precise function of miR-76 is unknown. | Paper_evidence | WBPaper00004927 | |||||
| WBPaper00005825 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 08 Feb 2005 00:00:00 | ||||||||
| Automated_description | Enriched in neurons based on RNA-seq studies. Is affected by several genes including prg-1; alg-1; and alg-2 based on RNA-seq studies. Is affected by nicotine based on quantitative PCR studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | C44B11.5 | |||||||
| C44B11.5a | |||||||||
| C44B11.5b | |||||||||
| Associated_feature | WBsf979109 | ||||||||
| Experimental_info | Expr_pattern | Expr2470 | |||||||
| Expr8469 | |||||||||
| Expr10938 | |||||||||
| Drives_construct | WBCnstr00005511 | ||||||||
| WBCnstr00016909 | |||||||||
| Expression_cluster (17) | |||||||||
| Interaction | WBInteraction000542162 | ||||||||
| Map_info | Map | III | Position | -7.47311 | Error | 0.010113 | |||
| Positive | Positive_clone | C44B11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004927 | ||||||||
| WBPaper00005825 | |||||||||
| WBPaper00031335 | |||||||||
| WBPaper00032329 | |||||||||
| WBPaper00032458 | |||||||||
| WBPaper00057263 | |||||||||
| WBPaper00061065 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
