WormBase Tree Display for Gene: WBGene00003172
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| WBGene00003172 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | mec-8 | Person_evidence | WBPerson95 | |||||
| Sequence_name | F46A9.6 | ||||||||
| Molecular_name | F46A9.6 | ||||||||
| F46A9.6.1 | |||||||||
| CE08260 | |||||||||
| F46A9.6.2 | |||||||||
| Other_name | CELE_F46A9.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | mec-8 | ||||||||
| DB_info | Database | AceView | gene | 1K18 | |||||
| WormQTL | gene | WBGene00003172 | |||||||
| WormFlux | gene | WBGene00003172 | |||||||
| NDB | locus_tag | CELE_F46A9.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003172|UniProtKB=G5ECJ4 | |||||||
| family | PTHR10501 | ||||||||
| NCBI | gene | 172771 | |||||||
| RefSeq | protein | NM_060107.7 | |||||||
| TREEFAM | TREEFAM_ID | TF351070 | |||||||
| TrEMBL | UniProtAcc | G5ECJ4 | |||||||
| UniProt_GCRP | UniProtAcc | G5ECJ4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info (12) | |||||||||
| Molecular_info | Corresponding_CDS | F46A9.6 | |||||||
| Corresponding_transcript | F46A9.6.1 | ||||||||
| F46A9.6.2 | |||||||||
| Other_sequence (24) | |||||||||
| Associated_feature (31) | |||||||||
| Gene_product_binds | WBsf047657 | ||||||||
| WBsf047658 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00002454 | ||||||||
| WBCnstr00006517 | |||||||||
| WBCnstr00010759 | |||||||||
| WBCnstr00036198 | |||||||||
| WBCnstr00041290 | |||||||||
| WBCnstr00042667 | |||||||||
| Construct_product | WBCnstr00006517 | ||||||||
| WBCnstr00010759 | |||||||||
| WBCnstr00016049 | |||||||||
| WBCnstr00036198 | |||||||||
| WBCnstr00041290 | |||||||||
| WBCnstr00042667 | |||||||||
| Regulate_expr_cluster | WBPaper00062197:mec-8_downregulated | ||||||||
| WBPaper00062197:mec-8_downregulated_TRN | |||||||||
| WBPaper00062197:mec-8_upregulated | |||||||||
| WBPaper00062197:mec-8_upregulated_TRN | |||||||||
| Antibody | WBAntibody00000576 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (163) | |||||||||
| Interaction (185) | |||||||||
| Map_info | Map | I | Position | 3.76436 | Error | 0.0003 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | C17E4 | |||||||
| C34A2 | |||||||||
| F46A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Mapping_data | 2_point | 27 | |||||||
| 5741 | |||||||||
| Multi_point (14) | |||||||||
| Pos_neg_data (18) | |||||||||
| Reference (119) | |||||||||
| Remark | [Lundquist EA] I'm quite certain that these polymorphisms are defects in the mec-8 gene. u456 and rh170 are small deletions of the same 2.5kb HIII fragment, u391 is a complex rearrangement that has a breakpoint in the same 2.5kb HIII fragment, and mn472 is a Tc1 insertion into the same 2.5kb HIII fragment. Furthermore, the area of these cosmids on the physical map is in good agreement with the genetic map position of mec-8. Rescue is hopefully on the way. | ||||||||
| Method | Gene |
