WormBase Tree Display for Gene: WBGene00003148
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| WBGene00003148 | Evidence | Person_evidence | WBPerson29 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_IV | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mbf-1 | Person_evidence | WBPerson29 | |||||
| Sequence_name | H21P03.1 | ||||||||
| Molecular_name | H21P03.1 | ||||||||
| H21P03.1.1 | |||||||||
| CE18819 | |||||||||
| Other_name | CELE_H21P03.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | mbf-1 | ||||||||
| DB_info | Database | AceView | gene | 4M244 | |||||
| WormQTL | gene | WBGene00003148 | |||||||
| WormFlux | gene | WBGene00003148 | |||||||
| NDB | locus_tag | CELE_H21P03.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003148|UniProtKB=Q9XTV4 | |||||||
| family | PTHR10245 | ||||||||
| NCBI | gene | 178071 | |||||||
| RefSeq | protein | NM_069765.8 | |||||||
| TREEFAM | TREEFAM_ID | TF300064 | |||||||
| TrEMBL | UniProtAcc | Q9XTV4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XTV4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mbf | ||||||||
| Allele (22) | |||||||||
| Strain | WBStrain00036428 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00101230 | ||||||||
| 00101231 | |||||||||
| 00101232 | |||||||||
| 00110614 | |||||||||
| Contained_in_operon | CEOP4444 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity. Predicted to be located in nucleus. Expressed in tail. Is an ortholog of human EDF1 (endothelial differentiation related factor 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H21P03.1 | |||||||
| Corresponding_transcript | H21P03.1.1 | ||||||||
| Other_sequence (78) | |||||||||
| Associated_feature | WBsf652216 | ||||||||
| WBsf668331 | |||||||||
| WBsf981823 | |||||||||
| WBsf230884 | |||||||||
| Gene_product_binds (70) | |||||||||
| Transcription_factor | WBTranscriptionFactor001030 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00049451 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033736 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016290 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6279 | ||||||||
| Expr1022740 | |||||||||
| Expr1031484 | |||||||||
| Expr1153178 | |||||||||
| Expr1200138 | |||||||||
| Expr2013430 | |||||||||
| Expr2031664 | |||||||||
| Drives_construct | WBCnstr00002492 | ||||||||
| WBCnstr00036217 | |||||||||
| Construct_product | WBCnstr00016780 | ||||||||
| WBCnstr00016814 | |||||||||
| WBCnstr00016815 | |||||||||
| WBCnstr00036217 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (148) | |||||||||
| Interaction | WBInteraction000151082 | ||||||||
| WBInteraction000162416 | |||||||||
| WBInteraction000162869 | |||||||||
| WBInteraction000162912 | |||||||||
| WBInteraction000162946 | |||||||||
| WBInteraction000162947 | |||||||||
| WBInteraction000163014 | |||||||||
| WBInteraction000167363 | |||||||||
| WBInteraction000167364 | |||||||||
| WBInteraction000173637 | |||||||||
| WBInteraction000185402 | |||||||||
| WBInteraction000185403 | |||||||||
| WBInteraction000188592 | |||||||||
| WBInteraction000211124 | |||||||||
| WBInteraction000234180 | |||||||||
| WBInteraction000235567 | |||||||||
| WBInteraction000236137 | |||||||||
| WBInteraction000259160 | |||||||||
| WBInteraction000261621 | |||||||||
| WBInteraction000294290 | |||||||||
| WBInteraction000305787 | |||||||||
| WBInteraction000320334 | |||||||||
| WBInteraction000362985 | |||||||||
| WBInteraction000388602 | |||||||||
| WBInteraction000415583 | |||||||||
| WBInteraction000439241 | |||||||||
| WBInteraction000444513 | |||||||||
| WBInteraction000455800 | |||||||||
| WBInteraction000469482 | |||||||||
| WBInteraction000474023 | |||||||||
| WBInteraction000534671 | |||||||||
| WBInteraction000557811 | |||||||||
| WBInteraction000558939 | |||||||||
| WBInteraction000566221 | |||||||||
| WBInteraction000566500 | |||||||||
| WBInteraction000566863 | |||||||||
| WBInteraction000569408 | |||||||||
| WBInteraction000570445 | |||||||||
| WBInteraction000571110 | |||||||||
| WBInteraction000572076 | |||||||||
| WBInteraction000580145 | |||||||||
| WBInteraction000583680 | |||||||||
| WBInteraction000584101 | |||||||||
| Map_info | Map | IV | Position | 4.98838 | Error | 0.000462 | |||
| Positive | Positive_clone | H21P03 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061738 | |||||||||
| Remark | The naming of the locus mbf-1 is based on its high similarity with mbf1 gene in human, Drosophila, yeast, plant | Person_evidence | WBPerson29 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
