WormBase Tree Display for Gene: WBGene00003123
expand all nodes | collapse all nodes | view schema
| WBGene00003123 | SMap | S_parent | Sequence | R09B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | mag-1 | Person_evidence | WBPerson698 | |||||
| Sequence_name | R09B3.5 | ||||||||
| Molecular_name | R09B3.5 | ||||||||
| R09B3.5.1 | |||||||||
| CE16310 | |||||||||
| Other_name | CELE_R09B3.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | mag-1 | ||||||||
| DB_info | Database | AceView | gene | 1M504 | |||||
| WormQTL | gene | WBGene00003123 | |||||||
| WormFlux | gene | WBGene00003123 | |||||||
| NDB | locus_tag | CELE_R09B3.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003123|UniProtKB=P49029 | |||||||
| family | PTHR12638 | ||||||||
| NCBI | gene | 173073 | |||||||
| RefSeq | protein | NM_060624.9 | |||||||
| SwissProt | UniProtAcc | P49029 | |||||||
| TREEFAM | TREEFAM_ID | TF300128 | |||||||
| UniProt_GCRP | UniProtAcc | P49029 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mag | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Contained_in_operon | CEOP1660 | ||||||||
| Ortholog (41) | |||||||||
| Structured_description | Automated_description | Involved in feminization of hermaphroditic germ-line; nuclear mRNA surveillance; and positive regulation of reproductive process. Predicted to be located in nucleus. Predicted to be part of catalytic step 2 spliceosome and exon-exon junction complex. Is an ortholog of human MAGOH (mago homolog, exon junction complex subunit) and MAGOHB (mago homolog B, exon junction complex subunit). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R09B3.5 | |||||||
| Corresponding_transcript | R09B3.5.1 | ||||||||
| Other_sequence (92) | |||||||||
| Associated_feature | WBsf649641 | ||||||||
| WBsf220379 | |||||||||
| Experimental_info | RNAi_result (29) | ||||||||
| Expr_pattern | Expr968 | ||||||||
| Expr1025831 | |||||||||
| Expr1031473 | |||||||||
| Expr1155264 | |||||||||
| Expr2013349 | |||||||||
| Expr2031581 | |||||||||
| Drives_construct | WBCnstr00000377 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction (168) | |||||||||
| Map_info | Map | I | Position | 12.9676 | Error | 0.015121 | |||
| Positive | Positive_clone | R09B3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (25) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
