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WormBase Tree Display for Gene: WBGene00003075

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Name Class

WBGene00003075SMapS_parentSequenceT04H1
IdentityVersion1
NameCGC_namelrx-1Person_evidenceWBPerson220
Sequence_nameT04H1.6
Molecular_nameT04H1.6
T04H1.6.1
CE38413
Other_nameegf-5
CELE_T04H1.6Accession_evidenceNDBBX284605
Public_namelrx-1
DB_infoDatabaseAceViewgene5M735
WormQTLgeneWBGene00003075
WormFluxgeneWBGene00003075
NDBlocus_tagCELE_T04H1.6
PanthergeneCAEEL|WormBase=WBGene00003075|UniProtKB=Q22179
familyPTHR24270
NCBIgene192091
RefSeqproteinNM_073671.6
TREEFAMTREEFAM_IDTF316777
TrEMBLUniProtAccQ22179
UniProt_GCRPUniProtAccQ22179
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:30WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlrx
Allele (50)
Legacy_information[C.elegansII] NMK. Cross hybridization to lrp-1 probe. [GS]
StrainWBStrain00032960
RNASeq_FPKM (74)
Ortholog (27)
ParalogWBGene00003245Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_description (2)
Molecular_infoCorresponding_CDST04H1.6
Corresponding_CDS_historyT04H1.6:wp141
Corresponding_transcriptT04H1.6.1
Other_sequenceFG350754.1
JI219905.1
Associated_featureWBsf647352
WBsf1001545
WBsf1001546
WBsf1020547
WBsf1020548
WBsf232621
Experimental_infoRNAi_resultWBRNAi00018160Inferred_automaticallyRNAi_primary
WBRNAi00052420Inferred_automaticallyRNAi_primary
WBRNAi00018159Inferred_automaticallyRNAi_primary
WBRNAi00035154Inferred_automaticallyRNAi_primary
Expr_patternExpr1020816
Expr1031450
Expr1156044
Expr2013286
Expr2031517
Drives_constructWBCnstr00036248
Construct_productWBCnstr00036248
Microarray_results (19)
Expression_cluster (158)
Interaction (79)
Map_infoMapVPosition3.93Error0.005731
PositivePositive_cloneGS#LRP2
T04H1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00055090
WBPaper00064648
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene