WormBase Tree Display for Gene: WBGene00003062
expand all nodes | collapse all nodes | view schema
WBGene00003062 | Evidence | Paper_evidence | WBPaper00005707 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | K09H9 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | lpd-6 | Person_evidence | WBPerson545 | |||||
Sequence_name | K09H9.6 | ||||||||
Molecular_name | K09H9.6 | ||||||||
K09H9.6.1 | |||||||||
CE37030 | |||||||||
Other_name | CELE_K09H9.6 | Accession_evidence | NDB | BX284601 | |||||
Public_name | lpd-6 | ||||||||
DB_info | Database | AceView | gene | 1D714 | |||||
WormQTL | gene | WBGene00003062 | |||||||
WormFlux | gene | WBGene00003062 | |||||||
NDB | locus_tag | CELE_K09H9.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003062|UniProtKB=O44991 | |||||||
family | PTHR12661 | ||||||||
NCBI | gene | 171886 | |||||||
RefSeq | protein | NM_058707.6 | |||||||
TREEFAM | TREEFAM_ID | TF318923 | |||||||
TrEMBL | UniProtAcc | O44991 | |||||||
UniProt_GCRP | UniProtAcc | O44991 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lpd | ||||||||
Allele (63) | |||||||||
Strain | WBStrain00051139 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00033745 | ||||||||
00033746 | |||||||||
00033747 | |||||||||
00033748 | |||||||||
00110535 | |||||||||
00110536 | |||||||||
Ortholog (40) | |||||||||
Paralog | WBGene00050926 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
WBGene00044219 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
WBGene00023323 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
WBGene00013589 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
Structured_description (2) | |||||||||
Molecular_info | Corresponding_CDS | K09H9.6 | |||||||
Corresponding_CDS_history | K09H9.6:wp126 | ||||||||
Corresponding_transcript | K09H9.6.1 | ||||||||
Other_sequence (46) | |||||||||
Associated_feature | WBsf649009 | ||||||||
WBsf219097 | |||||||||
Experimental_info | RNAi_result (13) | ||||||||
Expr_pattern | Expr1021591 | ||||||||
Expr1031440 | |||||||||
Expr1154178 | |||||||||
Expr2013253 | |||||||||
Expr2031484 | |||||||||
Drives_construct | WBCnstr00036254 | ||||||||
Construct_product | WBCnstr00036254 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (130) | |||||||||
Interaction (254) | |||||||||
WBProcess | WBbiopr:00000121 | ||||||||
Map_info | Map | I | Position | -4.47544 | Error | 0.000279 | |||
Positive | Positive_clone | K09H9 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005707 | ||||||||
WBPaper00029292 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064339 | |||||||||
WBPaper00064663 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |