WormBase Tree Display for Gene: WBGene00003061
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| WBGene00003061 | Evidence | Paper_evidence | WBPaper00005707 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | ZK973 | ||||||
| Identity | Version | 3 | |||||||
| Name | CGC_name | lpd-5 | Person_evidence | WBPerson545 | |||||
| Sequence_name | ZK973.10 | ||||||||
| Molecular_name | ZK973.10 | ||||||||
| ZK973.10.1 | |||||||||
| CE40009 | |||||||||
| Other_name | nduf-4 | ||||||||
| ndus-4 | Person_evidence | WBPerson555 | |||||||
| CELE_ZK973.10 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | lpd-5 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 26 Feb 2008 13:52:33 | WBPerson2970 | Name_change | Other_name | nduf-4 | ||||
| 3 | 16 Jan 2023 18:37:21 | WBPerson51134 | Name_change | Other_name | ndus-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lpd | ||||||||
| Allele (17) | |||||||||
| Strain | WBStrain00037027 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP1176 | ||||||||
| Ortholog (36) | |||||||||
| Structured_description | Concise_description | lpd-5 is orthologous to the human gene NADH DEHYDROGENASE (UBIQUINONE) FE-S PROTEIN 4 (18KD) (NADH-COENZYME Q REDUCTASE) (NDUFS4; OMIM:602694), which when mutated leads to NADH:ubiquinone oxidoreductase (complex I) deficiency. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in lipid storage. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Used to study mitochondrial metabolism disease. Human ortholog(s) of this gene implicated in Leigh disease and nuclear type mitochondrial complex I deficiency 1. Is an ortholog of human NDUFS4 (NADH:ubiquinone oxidoreductase subunit S4). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:700 | Homo sapiens | Paper_evidence | WBPaper00064182 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 11 Oct 2022 00:00:00 | ||||||||
| Potential_model | DOID:0112074 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7711) | |||||
| DOID:3652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7711) | ||||||
| Models_disease_in_annotation | WBDOannot00001328 | ||||||||
| WBDOannot00001334 | |||||||||
| Molecular_info | Corresponding_CDS | ZK973.10 | |||||||
| Corresponding_CDS_history | ZK973.10:wp155 | ||||||||
| Corresponding_transcript | ZK973.10.1 | ||||||||
| Other_sequence (81) | |||||||||
| Associated_feature | WBsf649092 | ||||||||
| WBsf219267 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr1021167 | ||||||||
| Expr1031439 | |||||||||
| Expr1163292 | |||||||||
| Expr2013252 | |||||||||
| Expr2031483 | |||||||||
| Drives_construct | WBCnstr00036255 | ||||||||
| Construct_product | WBCnstr00036255 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction (62) | |||||||||
| WBProcess | WBbiopr:00000121 | ||||||||
| Map_info | Map | I | Position | -1.38084 | Error | 0.015204 | |||
| Positive | Positive_clone | ZK973 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
