WormBase Tree Display for Gene: WBGene00002083
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| WBGene00002083 | SMap | S_parent | Sequence | F57B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | inf-1 | |||||||
| Sequence_name | F57B9.6 | ||||||||
| Molecular_name | F57B9.6a | ||||||||
| F57B9.6a.1 | |||||||||
| CE01341 | |||||||||
| F57B9.6b | |||||||||
| CE38524 | |||||||||
| F57B9.6b.1 | |||||||||
| Other_name | CeIF | ||||||||
| Ce1F | |||||||||
| CELE_F57B9.6 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | inf-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | inf | ||||||||
| Allele (27) | |||||||||
| Legacy_information | [C.elegansII] NMK. 1.7 kb RNA, encodes DEAD box RNA helicase, probable homolog of eukaryotic initiation factor 4A (71% identity to mouse eIF-4A). [Roussel and Bennett 1992; Seydoux and Fire 1994; KB] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Contained_in_operon | CEOP3404 | ||||||||
| Ortholog (41) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Concise_description | inf-1 encodes a protein with high similarity to eukaryotic initiation factor 4A. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable translation initiation factor activity. Predicted to be involved in cytoplasmic translational initiation. Predicted to be located in cytoplasmic stress granule. Expressed in germ line; intestine; and neurons. Is an ortholog of human EIF4A1 (eukaryotic translation initiation factor 4A1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070512 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3284) | ||||
| Molecular_info | Corresponding_CDS | F57B9.6a | |||||||
| F57B9.6b | |||||||||
| Corresponding_CDS_history | F57B9.6:wp142 | ||||||||
| Corresponding_transcript | F57B9.6a.1 | ||||||||
| F57B9.6b.1 | |||||||||
| Other_sequence (115) | |||||||||
| Associated_feature | WBsf659131 | ||||||||
| WBsf659132 | |||||||||
| WBsf225171 | |||||||||
| WBsf225172 | |||||||||
| WBsf225173 | |||||||||
| WBsf225174 | |||||||||
| WBsf225175 | |||||||||
| Experimental_info | RNAi_result (37) | ||||||||
| Expr_pattern | Expr559 | ||||||||
| Expr4583 | |||||||||
| Expr6239 | |||||||||
| Expr1028296 | |||||||||
| Expr1031235 | |||||||||
| Expr1152592 | |||||||||
| Expr2012741 | |||||||||
| Expr2030978 | |||||||||
| Drives_construct | WBCnstr00004183 | ||||||||
| WBCnstr00012092 | |||||||||
| WBCnstr00036468 | |||||||||
| Construct_product | WBCnstr00036468 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (208) | |||||||||
| Interaction (379) | |||||||||
| Map_info | Map | III | Position | -0.894974 | Error | 0.001192 | |||
| Positive | Positive_clone | F57B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| KB#LC2 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
