WormBase Tree Display for Gene: WBGene00002039
expand all nodes | collapse all nodes | view schema
| WBGene00002039 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hum-6 | |||||||
| Sequence_name | T10H10.1 | ||||||||
| Molecular_name | T10H10.1 | ||||||||
| T10H10.1.1 | |||||||||
| CE13575 | |||||||||
| Other_name | CELE_T10H10.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | hum-6 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hum | ||||||||
| Allele (143) | |||||||||
| Legacy_information | [Baker JP, Titus MA] No mutants known. Encodes class VII unconventional myosin. Predicted gene T10H10.1 | ||||||||
| Strain | WBStrain00032518 | ||||||||
| WBStrain00032554 | |||||||||
| WBStrain00035768 | |||||||||
| WBStrain00049467 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Ortholog (40) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | hum-6 is orthologous to the human gene MYOSIN VIIA (MYO7A; OMIM:276903), which when mutated leads to Usher syndrome type IB. | Paper_evidence | WBPaper00004103 | |||||
| Curator_confirmed | WBPerson1823 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in actin filament-based process; sensory organ development; and sensory perception of sound. Predicted to be located in several cellular components, including actin cytoskeleton; microvillus; and vesicle. Predicted to be part of myosin VI complex. Human ortholog(s) of this gene implicated in several diseases, including Usher syndrome type 1; auditory system disease (multiple); and congenital nystagmus. Is an ortholog of human MYO7A (myosin VIIA). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110826 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7606) | ||||
| DOID:0110543 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7606) | ||||||
| DOID:0110477 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7606) | ||||||
| DOID:9649 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7606) | ||||||
| DOID:14791 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7606) | ||||||
| DOID:10003 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7606) | ||||||
| DOID:0050439 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7606) | ||||||
| Molecular_info | Corresponding_CDS | T10H10.1 | |||||||
| Corresponding_transcript | T10H10.1.1 | ||||||||
| Other_sequence (24) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053070 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018560 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011980 | ||||||||
| Expr1031194 | |||||||||
| Expr1156679 | |||||||||
| Expr2012648 | |||||||||
| Expr2030884 | |||||||||
| Drives_construct | WBCnstr00036501 | ||||||||
| Construct_product | WBCnstr00036501 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (197) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | X | Position | -15.8362 | Error | 0.0341 | |||
| Positive | Positive_clone | T10H10 | Person_evidence | WBPerson658 | |||||
| Author_evidence | Baker JP | ||||||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 4428 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002905 | ||||||||
| WBPaper00025258 | |||||||||
| WBPaper00031923 | |||||||||
| WBPaper00038481 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064860 | |||||||||
| Remark | From Baker & Titus (1997) | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
