WormBase Tree Display for Gene: WBGene00002038

WBGene00002038 SMap: S_parent: Sequence: T02C12
  Identity: Version: 1
    Name: CGC_name: hum-5
      Sequence_name: T02C12.1
      Molecular_name: T02C12.1
        T02C12.1.1
        CE01061
        T02C12.1.2
      Other_name: mceIA Accession_evidence: EMBL X75564
        CELE_T02C12.1 Accession_evidence: NDB BX284603
      Public_name: hum-5
    DB_info: Database: AceView gene 3F120
        WormQTL gene WBGene00002038
        WormFlux gene WBGene00002038
        NDB locus_tag CELE_T02C12.1
        Panther gene CAEEL|WormBase=WBGene00002038|UniProtKB=G5ECZ0
          family PTHR13140
        NCBI gene 175521
        RefSeq protein NM_065408.8
        TrEMBL UniProtAcc G5ECZ0
        UniProt_GCRP UniProtAcc G5ECZ0
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hum
    Allele (97)
    Legacy_information: NMK. Encodes predicted unconventional myosin,heavy chain, class I. [CB; CGC] Map III
    Strain: WBStrain00032253
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog: WBGene00061598 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039234 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144221 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00114548 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00137931 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00233602 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g6113 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g11163 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6591 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6584 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1381 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17039 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11753 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6140 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12119 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g17729 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25255 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16834 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00616.g12813 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-hum-5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17497 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02591.g27152 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_06472.g36583 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19901 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008853 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04752 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g3136 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30002200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7360 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00212913 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216580 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00246194 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00205642 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00291504 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296307 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0086347 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-130531-15 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060503-562 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:7598 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:13880 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1927091 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:107728 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:621321 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1306016 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (21)
    Structured_description: Automated_description: Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in actin filament organization and vesicle transport along actin filament. Predicted to be located in several cellular components, including actin cytoskeleton; microvillus; and vesicle. Predicted to be part of myosin complex. Expressed in head and tail. Is an ortholog of human MYO1G (myosin IG). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T02C12.1
    Corresponding_transcript: T02C12.1.1
      T02C12.1.2
    Other_sequence (30)
    Associated_feature (14)
  Experimental_info: RNAi_result: WBRNAi00005064 Inferred_automatically: RNAi_primary
      WBRNAi00030255 Inferred_automatically: RNAi_primary
      WBRNAi00018014 Inferred_automatically: RNAi_primary
      WBRNAi00114638 Inferred_automatically: RNAi_primary
      WBRNAi00052193 Inferred_automatically: RNAi_primary
      WBRNAi00066058 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1941
      Expr6569
      Expr1021076
      Expr1031193
      Expr1155826
      Expr2012647
      Expr2030883
    Drives_construct: WBCnstr00003621
      WBCnstr00006450
      WBCnstr00036502
    Construct_product: WBCnstr00036502
    Microarray_results (19)
    Expression_cluster (183)
    Interaction (13)
  Map_info: Map: III Position: -4.02044 Error: 0.003527
    Positive: Positive_clone: T02C12 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5482
        4627
    Pseudo_map_position
  Reference: WBPaper00002905
    WBPaper00028984
    WBPaper00038491
    WBPaper00055090
    WBPaper00064860
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene