WormBase Tree Display for Gene: WBGene00002024
expand all nodes | collapse all nodes | view schema
| WBGene00002024 | SMap | S_parent | Sequence | C14F11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hsp-43 | Person_evidence | WBPerson36 | |||||
| Sequence_name | C14F11.5 | ||||||||
| Molecular_name | C14F11.5a | ||||||||
| C14F11.5a.1 | |||||||||
| CE03986 | |||||||||
| C14F11.5b | |||||||||
| CE46960 | |||||||||
| C14F11.5b.1 | |||||||||
| Other_name | CELE_C14F11.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | hsp-43 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00002024 | |||||
| WormFlux | gene | WBGene00002024 | |||||||
| NDB | locus_tag | CELE_C14F11.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002024|UniProtKB=B0M0L8 | |||||||
| family | PTHR45640 | ||||||||
| NCBI | gene | 180895 | |||||||
| RefSeq | protein | NM_001129635.6 | |||||||
| NM_001392785.1 | |||||||||
| TrEMBL | UniProtAcc | H2KYS1 | |||||||
| B0M0L8 | |||||||||
| UniProt_GCRP | UniProtAcc | B0M0L8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hsp | ||||||||
| Allele (46) | |||||||||
| Strain | WBStrain00031538 | ||||||||
| WBStrain00034986 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005550 | ||||||||
| 00005551 | |||||||||
| 00005552 | |||||||||
| 00005553 | |||||||||
| 00005554 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Concise_description | hsp-43 encodes a member of the hsp20 family. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable unfolded protein binding activity. Predicted to be involved in protein refolding and response to heat. Predicted to be located in cytoplasm and nucleus. Expressed in several structures, including copulatory spicule; hermaphrodite gonad; pharyngeal-intestinal valve; rectal valve cell; and vulva. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed (2) | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C14F11.5a | |||||||
| C14F11.5b | |||||||||
| Corresponding_CDS_history | C14F11.5:wp187 | ||||||||
| C14F11.5b:wp229 | |||||||||
| Corresponding_transcript | C14F11.5a.1 | ||||||||
| C14F11.5b.1 | |||||||||
| Other_sequence | GPC02424_1 | ||||||||
| HCC00368_1 | |||||||||
| OVC00068_1 | |||||||||
| ACC22870_1 | |||||||||
| HG07661 | |||||||||
| Dviv_isotig08900 | |||||||||
| GRC00474_1 | |||||||||
| HC01815 | |||||||||
| MHC04676_1 | |||||||||
| ES743975.1 | |||||||||
| FC540272.1 | |||||||||
| ASC04737_1 | |||||||||
| Acan_isotig03668 | |||||||||
| MIC02700_1 | |||||||||
| ACC02473_1 | |||||||||
| EY464411.1 | |||||||||
| MH06898 | |||||||||
| EY461777.1 | |||||||||
| ES742367.1 | |||||||||
| CJC04892_1 | |||||||||
| EX559144.1 | |||||||||
| AI253461.1 | |||||||||
| ES743777.1 | |||||||||
| EY460150.1 | |||||||||
| Oden_isotig14387 | |||||||||
| AI130214.1 | |||||||||
| JO469666.1 | |||||||||
| ACC16677_1 | |||||||||
| EY460470.1 | |||||||||
| EY466551.1 | |||||||||
| Hbac_isotig01447 | |||||||||
| EY463800.1 | |||||||||
| JI465387.1 | |||||||||
| JI171973.1 | |||||||||
| MH02695 | |||||||||
| Tcol_isotig15604 | |||||||||
| HG03343 | |||||||||
| HG00805 | |||||||||
| MIC08869_1 | |||||||||
| ACC40594_1 | |||||||||
| HGC09096_1 | |||||||||
| JI478512.1 | |||||||||
| Oden_isotig14386 | |||||||||
| HGC00233_1 | |||||||||
| EX549462.1 | |||||||||
| AW355741.1 | |||||||||
| EX007521.1 | |||||||||
| FC553960.1 | |||||||||
| FC547037.1 | |||||||||
| EY467702.1 | |||||||||
| JI464135.1 | |||||||||
| ACC02144_1 | |||||||||
| FC545023.1 | |||||||||
| GP03161 | |||||||||
| AA680574.1 | |||||||||
| HG10167 | |||||||||
| MC03642 | |||||||||
| EY465266.1 | |||||||||
| ACC05906_1 | |||||||||
| Dviv_isotig08901 | |||||||||
| EY465108.1 | |||||||||
| AA934211.1 | |||||||||
| EX916617.1 | |||||||||
| MCC05108_1 | |||||||||
| FC540340.1 | |||||||||
| CBC04575_1 | |||||||||
| Tcir_isotig07609 | |||||||||
| HBC02757_1 | |||||||||
| AS12952 | |||||||||
| Dviv_isotig08899 | |||||||||
| BXC01824_1 | |||||||||
| ACC15787_1 | |||||||||
| AS08795 | |||||||||
| ASC12945_1 | |||||||||
| Acan_isotig03667 | |||||||||
| FC541727.1 | |||||||||
| FC543229.1 | |||||||||
| Associated_feature | WBsf670615 | ||||||||
| WBsf1005528 | |||||||||
| WBsf237461 | |||||||||
| WBsf237462 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040559 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001043 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076126 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010764 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091468 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106388 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033481 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00091467 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1118 | ||||||||
| Expr8560 | |||||||||
| Expr15505 | |||||||||
| Expr1026872 | |||||||||
| Expr1031179 | |||||||||
| Expr1144614 | |||||||||
| Expr1200270 | |||||||||
| Expr2012626 | |||||||||
| Expr2030862 | |||||||||
| Drives_construct | WBCnstr00036513 | ||||||||
| WBCnstr00042196 | |||||||||
| Construct_product | WBCnstr00036513 | ||||||||
| WBCnstr00042196 | |||||||||
| Antibody | WBAntibody00000325 | ||||||||
| WBAntibody00001840 | |||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (245) | |||||||||
| Interaction (198) | |||||||||
| Map_info | Map | X | Position | -3.27567 | Error | 0.042036 | |||
| Positive | Positive_clone | C14F11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4387 | |||||||
| 4420 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00013029 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041128 | |||||||||
| WBPaper00051677 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060685 | |||||||||
| WBPaper00061750 | |||||||||
| WBPaper00061766 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
