WormBase Tree Display for Gene: WBGene00001977
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| WBGene00001977 | SMap | S_parent | Sequence | Y17G7A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hmg-12 | |||||||
| Sequence_name | Y17G7A.1 | ||||||||
| Molecular_name | Y17G7A.1 | ||||||||
| Y17G7A.1.1 | |||||||||
| CE21378 | |||||||||
| Other_name | hmg-I-beta | Accession_evidence | EMBL | AF056579 | |||||
| CELE_Y17G7A.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | hmg-12 | ||||||||
| DB_info | Database | AceView | gene | 2M207 | |||||
| WormQTL | gene | WBGene00001977 | |||||||
| WormFlux | gene | WBGene00001977 | |||||||
| NDB | locus_tag | CELE_Y17G7A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001977|UniProtKB=G5EDQ2 | |||||||
| family | PTHR23341 | ||||||||
| NCBI | gene | 174829 | |||||||
| RefSeq | protein | NM_064143.8 | |||||||
| SwissProt | UniProtAcc | G5EDQ2 | |||||||
| UniProt_GCRP | UniProtAcc | G5EDQ2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hmg | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog | chrII_pilon.g6064 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enables RNA polymerase II core promoter sequence-specific DNA binding activity. Involved in positive regulation of gene expression. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y17G7A.1 | |||||||
| Corresponding_transcript | Y17G7A.1.1 | ||||||||
| Other_sequence | AF056579 | ||||||||
| Associated_feature | WBsf644730 | ||||||||
| WBsf644731 | |||||||||
| WBsf976369 | |||||||||
| WBsf976370 | |||||||||
| WBsf978694 | |||||||||
| WBsf981300 | |||||||||
| WBsf222212 | |||||||||
| WBsf222213 | |||||||||
| Transcription_factor | WBTranscriptionFactor000376 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036662 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055569 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020078 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007651 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021380 | ||||||||
| Expr1031147 | |||||||||
| Expr1159072 | |||||||||
| Expr2012518 | |||||||||
| Expr2030757 | |||||||||
| Drives_construct | WBCnstr00036546 | ||||||||
| Construct_product | WBCnstr00036546 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (181) | |||||||||
| Interaction (199) | |||||||||
| Map_info | Map | II | Position | 4.13684 | Error | 0.000569 | |||
| Positive | Positive_clone | Y17G7A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005486 | ||||||||
| WBPaper00027309 | |||||||||
| WBPaper00032967 | |||||||||
| WBPaper00060254 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
