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WormBase Tree Display for Gene: WBGene00001945

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Name Class

WBGene00001945SMapS_parentSequenceF45E1
IdentityVersion1
NameCGC_namehis-71Person_evidenceWBPerson160
Sequence_nameF45E1.6
Molecular_nameF45E1.6
F45E1.6.1
CE01943
Other_nameCELE_F45E1.6Accession_evidenceNDBBX284606
Public_namehis-71
DB_infoDatabaseAceViewgeneXI600
WormQTLgeneWBGene00001945
WormFluxgeneWBGene00001945
NDBlocus_tagCELE_F45E1.6
PanthergeneCAEEL|WormBase=WBGene00001945|UniProtKB=Q10453
familyPTHR11426
NCBIgene181057
RefSeqproteinNM_076943.7
SwissProtUniProtAccQ10453
UniProt_GCRPUniProtAccQ10453
OMIMgene601058
601128
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhis
Allele (20)
Possibly_affected_byWBVar02153220
StrainWBStrain00032472
WBStrain00007466
WBStrain00007461
WBStrain00034735
RNASeq_FPKM (74)
GO_annotation (11)
Ortholog (59)
Paralog (24)
Structured_descriptionConcise_descriptionhis-71 encodes an H3 histone required for embryonic viability, body morphology, and larval viability.Paper_evidenceWBPaper00004651
WBPaper00005654
Curator_confirmedWBPerson48
WBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be located in nucleus. Predicted to be part of nucleosome. Expressed in several structures, including somatic cell. Is an ortholog of human H3-3A (H3.3 histone A) and H3-3B (H3.3 histone B).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelEFO:MONDO:0031200Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4764,HGNC:4765)
Molecular_infoCorresponding_CDSF45E1.6
Corresponding_transcriptF45E1.6.1
Other_sequenceFG353417.1
FG348213.1
NBC01222_1
FG354861.1
DN557222.1
EX501092.1
ES564243.1
TM01993
FG355117.1
OOC03670_1
LSC00398_1
TS00539
FG353100.1
FG353306.1
ES563986.1
FG352353.1
DN557563.1
FG580419.1
FG587679.1
XI03478
AA293915.1
NAC02440_1
FG351892.1
ES567400.1
XI00474
ES562510.1
BU088987.1
FG587434.1
ES565767.1
PT01451
DN557501.1
PTC00924_1
GW412530.1
ES561710.1
FG348652.1
AA294369.1
MIC03942_1
BMC02205_1
FG352051.1
HCC02512_1
FG352668.1
ES413478.1
Dviv_isotig23369
CN477770.1
ASC28144_1
EX914524.1
PEC00417_1
AI055784.1
FG352173.1
Oden_isotig21821
Hbac_isotig04988
FG354829.1
HG05538
TSC00145_2
FG353607.1
FG587191.1
AY028698.1
OVC03907_1
FG588382.1
MH10778
FG585409.1
FE919688.1
FG350080.1
FG348331.1
TS01209
FG355629.1
ES741757.1
XI01056
ES570636.1
FG355225.1
FG350900.1
DN557379.1
ES273536.1
FG582876.1
AF323993.1
ACC20761_1
EF066641.1
TM02159
FG355663.1
XIC05628_1
FG583597.1
DN190324.1
TMC05225_1
FG588030.1
FG351479.1
FG353349.1
FG585372.1
FG355802.1
FE918596.1
TM00023
FG348792.1
ES413468.1
HBC20757_1
ES565673.1
ES565273.1
MPC01497_1
DN557638.1
AA294001.1
FG349570.1
FG583077.1
PE00489
FG581398.1
GW411000.1
ES564295.1
XIC01718_1
JI221957.1
FE915163.1
TSC00145_1
FG585739.1
FG355396.1
Tcir_isotig05096
DN557394.1
NB07250
FG350395.1
ES562762.1
BMC01609_1
FG351061.1
MI04945
XIC01126_1
FG347565.1
TMC00128_1
FG580725.1
AI130150.1
EX013543.1
FG584822.1
FG586967.1
GO251292.1
FG351693.1
Tcir_isotig05095
ES570769.1
FG588630.1
FG350371.1
FG588445.1
FG354209.1
CBC09786_1
FG583908.1
TSC02905_1
FG351969.1
GW406064.1
BXC04453_1
FG347574.1
AW257785.1
ES561177.1
ES567743.1
FG586652.1
FG351968.1
AW980261.1
EX501549.1
DN558224.1
ES565641.1
Name_isotig02755
FG588631.1
EX011907.1
FG587433.1
TSC01717_1
GW409565.1
BXC00724_1
FG355911.1
ASC30287_1
DN557081.1
JI244793.1
JI177180.1
Tcol_isotig08549
FG352234.1
FE914936.1
HC04328
FG583549.1
FG349345.1
FG354852.1
XI00769
JI169859.1
TS01095
ES564955.1
Dviv_isotig27976
AI692138.1
AAC00039_1
Hbac_isotig04696
EX501069.1
HC04094
XIC01561_1
Tcol_isotig17031
FG350222.1
TMC00251_1
Associated_featureWBsf1006004
WBsf1006005
WBsf1006006
WBsf1023340
WBsf237632
Experimental_infoRNAi_result (21)
Expr_patternExpr4220
Expr4296
Expr6076
Expr15136
Expr1015060
Expr1151237
Expr1200188
Expr2012481
Expr2030720
Drives_constructWBCnstr00002895
WBCnstr00011836
WBCnstr00011893
WBCnstr00016936
WBCnstr00036571
Construct_productWBCnstr00011836
WBCnstr00016936
WBCnstr00036571
Regulate_expr_clusterWBPaper00054191:H3.3(null)_embryo_downregulated
WBPaper00054191:H3.3(null)_embryo_upregulated
WBPaper00054191:H3.3(null)_L1_downregulated
WBPaper00054191:H3.3(null)_L1_upregulated
Microarray_results (16)
Expression_cluster (198)
Interaction (212)
Map_infoMapXPosition-0.766026Error0.018254
PositivePositive_cloneF45E1Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5256
Pseudo_map_position
Reference (12)
RemarkSequence connection corrected from F54E1.6 [krb 030423]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene