WormBase Tree Display for Gene: WBGene00001938
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| WBGene00001938 | SMap | S_parent | Sequence | F22B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | his-64 | Person_evidence | WBPerson160 | |||||
| Sequence_name | F22B3.1 | ||||||||
| Molecular_name | F22B3.1 | ||||||||
| F22B3.1.1 | |||||||||
| CE03252 | |||||||||
| Other_name | his 10 | Accession_evidence | EMBL | X15634 | |||||
| CELE_F22B3.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | his-64 | ||||||||
| DB_info | Database | AceView | gene | 4M171 | |||||
| WormQTL | gene | WBGene00001938 | |||||||
| WormFlux | gene | WBGene00001938 | |||||||
| NDB | locus_tag | CELE_F22B3.1 | |||||||
| NCBI | gene | 178066 | |||||||
| RefSeq | protein | NM_069753.5 | |||||||
| SwissProt | UniProtAcc | P62784 | |||||||
| UniProt_GCRP | UniProtAcc | P62784 | |||||||
| OMIM | gene | 602826 | |||||||
| 602827 | |||||||||
| 602830 | |||||||||
| 602833 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | his | ||||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00106133 | ||||||||
| 00109760 | |||||||||
| 00109761 | |||||||||
| 00109762 | |||||||||
| Ortholog (95) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Concise_description | his-64 encodes an H4 histone. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Involved in positive regulation of transcription by RNA polymerase II. Expressed in head; somatic cell; and tail. Is an ortholog of several human genes including H4C1 (H4 clustered histone 1); H4C4 (H4 clustered histone 4); and H4C9 (H4 clustered histone 9). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | EFO:MONDO:0031400 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4785,HGNC:4787,HGNC:4790,HGNC:4793) | ||||
| Molecular_info | Corresponding_CDS | F22B3.1 | |||||||
| Corresponding_transcript | F22B3.1.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf646372 | ||||||||
| WBsf660708 | |||||||||
| WBsf997832 | |||||||||
| WBsf1018206 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Chronogram2071 | ||||||||
| Expr5821 | |||||||||
| Expr16328 | |||||||||
| Expr1031129 | |||||||||
| Expr1149198 | |||||||||
| Expr2012473 | |||||||||
| Expr2030712 | |||||||||
| Drives_construct | WBCnstr00002884 | ||||||||
| WBCnstr00004449 | |||||||||
| WBCnstr00036577 | |||||||||
| WBCnstr00042907 | |||||||||
| Construct_product | WBCnstr00036577 | ||||||||
| Microarray_results | SMD_F22B3.1 | ||||||||
| 172787_x_at | |||||||||
| A_12_P113935 | |||||||||
| GPL19516_CGZ0017432 | |||||||||
| GPL21109_F22B3.1 | |||||||||
| GPL8673_F22B3_1P00035 | |||||||||
| GPL8673_F22B3_1P00233 | |||||||||
| Expression_cluster (146) | |||||||||
| Interaction (289) | |||||||||
| Map_info | Map | IV | Position | 4.97881 | Error | 0.000902 | |||
| Positive | Positive_clone | F22B3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00013458 | ||||||||
| WBPaper00013476 | |||||||||
| WBPaper00024257 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040135 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057312 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
