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WormBase Tree Display for Gene: WBGene00001774

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Name Class

WBGene00001774EvidencePerson_evidenceWBPerson1846
SMapS_parentSequenceY53F4B
IdentityVersion1
NameCGC_namegst-26
Sequence_nameY53F4B.29
Molecular_nameY53F4B.29
Y53F4B.29.1
CE22416
Other_nameCELE_Y53F4B.29Accession_evidenceNDBBX284602
Public_namegst-26
DB_infoDatabaseAceViewgene2P450
WormQTLgeneWBGene00001774
WormFluxgeneWBGene00001774
NDBlocus_tagCELE_Y53F4B.29
PanthergeneCAEEL|WormBase=WBGene00001774|UniProtKB=Q9NAB4
familyPTHR11571
NCBIgene190223
RefSeqproteinNM_064714.9
TREEFAMTREEFAM_IDTF353041
TrEMBLUniProtAccQ9NAB4
UniProt_GCRPUniProtAccQ9NAB4
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgst
AlleleWBVar00793594
WBVar00793595
WBVar01386383
WBVar00386728
WBVar01498435
WBVar00277883
WBVar01498941
WBVar01499314
WBVar01989675
WBVar00793593
RNASeq_FPKM (74)
GO_annotation00095923
Contained_in_operonCEOP2664
Ortholog (51)
Paralog (45)
Structured_descriptionAutomated_descriptionEnriched in g1; head mesodermal cell; intestine; mechanosensory neurons; and muscle cell based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty chemicals including glutathione; rotenone; and Tunicamycin based on proteomic; RNA-seq; and microarray studies. Is predicted to encode a protein with the following domains: Glutathione S-transferase, N-terminal; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain superfamily; Glutathione S-transferase, C-terminal; and Thioredoxin-like superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY53F4B.29
Corresponding_transcriptY53F4B.29.1
Associated_featureWBsf224317
Experimental_infoRNAi_resultWBRNAi00115540Inferred_automaticallyRNAi_primary
WBRNAi00115475Inferred_automaticallyRNAi_primary
WBRNAi00020942Inferred_automaticallyRNAi_primary
WBRNAi00037422Inferred_automaticallyRNAi_primary
Expr_patternExpr1010411
Expr1160721
Expr2012310
Expr2030546
Drives_constructWBCnstr00036697
Construct_productWBCnstr00036697
Microarray_results (15)
Expression_cluster (229)
InteractionWBInteraction000376076
WBInteraction000471110
WBInteraction000560834
WBInteraction000563264
WBInteraction000571951
WBInteraction000577587
WBInteraction000579512
WBInteraction000584988
WBInteraction000586493
Map_infoMapIIPosition24.2214Error0.027655
PositivePositive_cloneY53F4BInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031973
WBPaper00038491
WBPaper00055090
WBPaper00056842
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene