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WormBase Tree Display for Gene: WBGene00001772

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Name Class

WBGene00001772EvidencePerson_evidenceWBPerson1846
SMapS_parentSequenceF37B1
IdentityVersion1
NameCGC_namegst-24
Sequence_nameF37B1.1
Molecular_nameF37B1.1
F37B1.1.1
CE17789
Other_nameCELE_F37B1.1Accession_evidenceNDBBX284602
Public_namegst-24
DB_infoDatabaseAceViewgene2N900
WormQTLgeneWBGene00001772
WormFluxgeneWBGene00001772
NDBlocus_tagCELE_F37B1.1
PanthergeneCAEEL|WormBase=WBGene00001772|UniProtKB=Q93694
familyPTHR11571
NCBIgene185407
RefSeqproteinNM_064458.6
TREEFAMTREEFAM_IDTF353041
TrEMBLUniProtAccQ93694
UniProt_GCRPUniProtAccQ93694
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgst
Allele (49)
StrainWBStrain00032881
WBStrain00032929
RNASeq_FPKM (74)
GO_annotation00086400
00086401
OrthologWBGene00039608Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00154746Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00158220Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00080227Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00091237Pristionchus pacificusFrom_analysisOMA
WBGene00091842Pristionchus pacificusFrom_analysisOMA
WBGene00099365Pristionchus pacificusFrom_analysisOMA
WBGene00132324Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00099367Pristionchus pacificusFrom_analysisOMA
CBOVI.g1796Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g5493Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g5515Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g6759Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g10557Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16861Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17223Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g3603Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8423Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2163Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5040Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00111.g4610Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00111.g4611Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00270.g8226Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-gst-24Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11312Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00129.g5110Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06820Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005834Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrII_pilon.g6390Caenorhabditis elegansFrom_analysisWormBase-Compara
FB:FBgn0010226Drosophila melanogasterFrom_analysisOrthoFinder
OrthoInspector
PhylomeDB
ZFIN:ZDB-GENE-040426-2720Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-070822-30Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoInspector
SonicParanoid
MGI:1859384Mus musculusFrom_analysisOMA
OrthoFinder
OrthoInspector
PhylomeDB
RGD:69251Rattus norvegicusFrom_analysisOMA
OrthoFinder
PhylomeDB
Paralog (45)
Structured_descriptionAutomated_descriptionInvolved in innate immune response. Expressed in head and tail.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF37B1.1
Corresponding_transcriptF37B1.1.1
Other_sequence (28)
Associated_featureWBsf650697
WBsf990467
WBsf1013666
WBsf224192
Experimental_infoRNAi_resultWBRNAi00070084Inferred_automaticallyRNAi_primary
WBRNAi00069827Inferred_automaticallyRNAi_primary
WBRNAi00094868Inferred_automaticallyRNAi_primary
WBRNAi00014472Inferred_automaticallyRNAi_primary
WBRNAi00046576Inferred_automaticallyRNAi_primary
WBRNAi00069845Inferred_automaticallyRNAi_primary
WBRNAi00069817Inferred_automaticallyRNAi_primary
WBRNAi00031902Inferred_automaticallyRNAi_primary
Expr_pattern (5)
Drives_constructWBCnstr00000766
WBCnstr00036699
Construct_productWBCnstr00036699
Microarray_results (18)
Expression_cluster (310)
InteractionWBInteraction000030824
WBInteraction000503792
WBInteraction000507434
WBInteraction000521067
WBInteraction000548209
WBInteraction000580026
Map_infoMapIIPosition18.7143Error0.013762
PositivePositive_cloneF37B1Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028883
WBPaper00032196
WBPaper00033133
WBPaper00038491
WBPaper00048470
WBPaper00055090
WBPaper00056842
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene