WormBase Tree Display for Gene: WBGene00001732
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| WBGene00001732 | Evidence | Paper_evidence | WBPaper00003717 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | E02A10 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | grl-23 | Person_evidence | WBPerson83 | |||||
| Sequence_name | E02A10.2 | ||||||||
| Molecular_name (21) | |||||||||
| Other_name | CELE_E02A10.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | grl-23 | ||||||||
| DB_info | Database | AceView | gene | 5N52 | |||||
| WormQTL | gene | WBGene00001732 | |||||||
| WormFlux | gene | WBGene00001732 | |||||||
| NDB | locus_tag | CELE_E02A10.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001732|UniProtKB=Q93424 | |||||||
| family | PTHR23261 | ||||||||
| NCBI | gene | 183983 | |||||||
| RefSeq | protein | NM_001347275.3 | |||||||
| NM_001347272.3 | |||||||||
| NM_001269502.3 | |||||||||
| NM_001347276.4 | |||||||||
| NM_001347271.3 | |||||||||
| NM_001347273.3 | |||||||||
| NM_001347274.3 | |||||||||
| TrEMBL | UniProtAcc | A0A1I6CMA0 | |||||||
| Q93424 | |||||||||
| H2L2E5 | |||||||||
| A0A1I6CM96 | |||||||||
| A0A1I6CMA4 | |||||||||
| A0A1I6CMA3 | |||||||||
| A0A1I6CM94 | |||||||||
| UniProt_GCRP | UniProtAcc | Q93424 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | grl | ||||||||
| Allele (49) | |||||||||
| Strain | WBStrain00037091 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Concise_description | grl-23 encodes a hedgehog-like protein, with (from N- to C-terminus) asignal sequence, a glycine-rich low-complexity region, a Ground-like(Grl) domain, and an acid-rich low-complexity region; the Grl domain ispredicted to form a cysteine-crosslinked protein involved inintercellular signalling, and it has subtle similarity to the N-terminalHedge domain of HEDGEHOG proteins. | Paper_evidence | WBPaper00003717 | |||||
| WBPaper00026841 | |||||||||
| WBPaper00027263 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 05 Nov 2006 00:00:00 | ||||||||
| Automated_description | Enriched in AVK; FLP; and neurons based on microarray and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; RNA-seq; and proteomic studies. Is affected by thirteen chemicals including methylmercuric chloride; Tunicamycin; and multi-walled carbon nanotube based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | E02A10.2a | |||||||
| E02A10.2b | |||||||||
| E02A10.2c | |||||||||
| E02A10.2d | |||||||||
| E02A10.2e | |||||||||
| E02A10.2f | |||||||||
| E02A10.2g | |||||||||
| Corresponding_CDS_history | E02A10.2b:wp256 | ||||||||
| Corresponding_transcript | E02A10.2a.1 | ||||||||
| E02A10.2b.1 | |||||||||
| E02A10.2c.1 | |||||||||
| E02A10.2d.1 | |||||||||
| E02A10.2e.1 | |||||||||
| E02A10.2f.1 | |||||||||
| E02A10.2g.1 | |||||||||
| Other_sequence (188) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043582 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030456 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4425 | ||||||||
| Expr1028523 | |||||||||
| Expr1031033 | |||||||||
| Expr1147571 | |||||||||
| Expr2012258 | |||||||||
| Expr2030494 | |||||||||
| Drives_construct | WBCnstr00011987 | ||||||||
| WBCnstr00036730 | |||||||||
| Construct_product | WBCnstr00036730 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | V | Position | 4.51155 | Error | 0.002499 | |||
| Positive | Positive_clone | E02A10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003717 | ||||||||
| WBPaper00028754 | |||||||||
| WBPaper00031588 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00064105 | |||||||||
| Remark | ground-like gene, contains ground-like domain, hedgehog-related | Paper_evidence | WBPaper00003717 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
