WormBase Tree Display for Gene: WBGene00001719
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| WBGene00001719 | Evidence | Paper_evidence | WBPaper00003717 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C26F1 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | grl-10 | Person_evidence | WBPerson83 | |||||
| Sequence_name | C26F1.5 | ||||||||
| Molecular_name | C26F1.5 | ||||||||
| C26F1.5.1 | |||||||||
| CE06879 | |||||||||
| Other_name | CELE_C26F1.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | grl-10 | ||||||||
| DB_info | Database | AceView | gene | 5I255 | |||||
| WormQTL | gene | WBGene00001719 | |||||||
| WormFlux | gene | WBGene00001719 | |||||||
| NDB | locus_tag | CELE_C26F1.5 | |||||||
| NCBI | gene | 179152 | |||||||
| RefSeq | protein | NM_072604.8 | |||||||
| TREEFAM | TREEFAM_ID | TF315611 | |||||||
| TrEMBL | UniProtAcc | Q18230 | |||||||
| UniProt_GCRP | UniProtAcc | Q18230 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | grl | ||||||||
| Allele (19) | |||||||||
| Strain | WBStrain00047694 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Concise_description | grl-10 encodes a hedgehog-like protein, with an N-terminal signalsequence and a C-terminal Ground-like (Grl) domain; the Grl domain ispredicted to form a cysteine-crosslinked protein involved inintercellular signalling, and it has subtle similarity to the N-terminalHedge domain of HEDGEHOG proteins. | Paper_evidence | WBPaper00003717 | |||||
| WBPaper00026841 | |||||||||
| WBPaper00027263 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 05 Nov 2006 00:00:00 | ||||||||
| Automated_description | Expressed in tail; vulA; vulB1; and vulB2. Is predicted to encode a protein with the following domain: Ground-like domain. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C26F1.5 | |||||||
| Corresponding_transcript | C26F1.5.1 | ||||||||
| Other_sequence | OOC03539_1 | ||||||||
| Acan_isotig13097 | |||||||||
| JI178153.1 | |||||||||
| Dviv_isotig35175 | |||||||||
| Associated_feature | WBsf646954 | ||||||||
| WBsf661433 | |||||||||
| WBsf232007 | |||||||||
| WBsf232008 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011223 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041283 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029239 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1456 | ||||||||
| Expr4450 | |||||||||
| Expr5345 | |||||||||
| Expr1010455 | |||||||||
| Expr1031028 | |||||||||
| Expr1145324 | |||||||||
| Expr2012244 | |||||||||
| Expr2030480 | |||||||||
| Drives_construct | WBCnstr00004503 | ||||||||
| WBCnstr00012015 | |||||||||
| WBCnstr00036741 | |||||||||
| Construct_product | WBCnstr00036741 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (194) | |||||||||
| Interaction (98) | |||||||||
| Map_info | Map | V | Position | 0.884834 | Error | 0.003719 | |||
| Positive | Positive_clone | C26F1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003717 | ||||||||
| WBPaper00028754 | |||||||||
| WBPaper00031588 | |||||||||
| WBPaper00053423 | |||||||||
| WBPaper00064105 | |||||||||
| Remark | ground-like gene, contains ground-like domain, hedgehog-related | Paper_evidence | WBPaper00003717 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
