WormBase Tree Display for Gene: WBGene00001677
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| WBGene00001677 | SMap | S_parent | Sequence | M04C7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gpa-15 | Person_evidence | WBPerson625 | |||||
| Sequence_name | M04C7.1 | ||||||||
| Molecular_name | M04C7.1 | ||||||||
| M04C7.1.1 | |||||||||
| CE28623 | |||||||||
| Other_name | CELE_M04C7.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | gpa-15 | ||||||||
| DB_info | Database | AceView | gene | 1J108 | |||||
| WormQTL | gene | WBGene00001677 | |||||||
| WormFlux | gene | WBGene00001677 | |||||||
| NDB | locus_tag | CELE_M04C7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001677|UniProtKB=P91907 | |||||||
| family | PTHR10218 | ||||||||
| NCBI | gene | 172645 | |||||||
| RefSeq | protein | NM_059911.3 | |||||||
| SwissProt | UniProtAcc | P91907 | |||||||
| UniProt_GCRP | UniProtAcc | P91907 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpa | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00028630 | ||||||||
| WBStrain00028631 | |||||||||
| WBStrain00028941 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (38) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | gpa-15 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases; it is expressed in ADL, ASH, ASK, PHA, PHB, the distal tip cell, the anchor cell, and many male-specific neurons. | Curator_confirmed | WBPerson48 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Located in non-motile cilium. Expressed in chemosensory neurons and hermaphrodite somatic gonadal cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M04C7.1 | |||||||
| Corresponding_CDS_history | M04C7.1:wp56 | ||||||||
| Corresponding_transcript | M04C7.1.1 | ||||||||
| Other_sequence | CJC16062_1 | ||||||||
| Associated_feature | WBsf663818 | ||||||||
| WBsf664576 | |||||||||
| WBsf219941 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034420 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004024 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050895 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1315 | ||||||||
| Expr1025840 | |||||||||
| Expr1030998 | |||||||||
| Expr1154591 | |||||||||
| Expr2012186 | |||||||||
| Expr2030422 | |||||||||
| Drives_construct | WBCnstr00000157 | ||||||||
| WBCnstr00000615 | |||||||||
| WBCnstr00001695 | |||||||||
| WBCnstr00004953 | |||||||||
| WBCnstr00005996 | |||||||||
| WBCnstr00014454 | |||||||||
| WBCnstr00036779 | |||||||||
| Construct_product | WBCnstr00001695 | ||||||||
| WBCnstr00010212 | |||||||||
| WBCnstr00036779 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | I | Position | 2.92947 | Error | 0.00985 | |||
| Positive | Positive_clone | M04C7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4381 | |||||||
| 5041 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002880 | ||||||||
| WBPaper00003465 | |||||||||
| WBPaper00004366 | |||||||||
| WBPaper00006103 | |||||||||
| WBPaper00006194 | |||||||||
| WBPaper00011741 | |||||||||
| WBPaper00022401 | |||||||||
| WBPaper00024990 | |||||||||
| WBPaper00028950 | |||||||||
| WBPaper00029015 | |||||||||
| WBPaper00029025 | |||||||||
| WBPaper00031303 | |||||||||
| WBPaper00031936 | |||||||||
| WBPaper00035254 | |||||||||
| WBPaper00040879 | |||||||||
| WBPaper00043908 | |||||||||
| WBPaper00056744 | |||||||||
| WBPaper00064634 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
