WormBase Tree Display for Gene: WBGene00001673
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WBGene00001673 | SMap | S_parent | Sequence | C16A11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | gpa-11 | Person_evidence | WBPerson625 | |||||
Sequence_name | C16A11.1 | ||||||||
Molecular_name | C16A11.1a | ||||||||
C16A11.1a.1 | |||||||||
CE20515 | |||||||||
C16A11.1b | |||||||||
CE45827 | |||||||||
C16A11.1a.2 | |||||||||
C16A11.1b.1 | |||||||||
Other_name | CELE_C16A11.1 | Accession_evidence | NDB | BX284602 | |||||
Public_name | gpa-11 | ||||||||
DB_info | Database | AceView | gene | 2E545 | |||||
WormQTL | gene | WBGene00001673 | |||||||
WormFlux | gene | WBGene00001673 | |||||||
NDB | locus_tag | CELE_C16A11.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001673|UniProtKB=O76584 | |||||||
family | PTHR10218 | ||||||||
NCBI | gene | 173759 | |||||||
RefSeq | protein | NM_001267160.2 | |||||||
NM_001267159.1 | |||||||||
SwissProt | UniProtAcc | O76584 | |||||||
UniProt_GCRP | UniProtAcc | O76584 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gpa | ||||||||
Allele (163) | |||||||||
Strain | WBStrain00028933 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (19) | |||||||||
Ortholog (64) | |||||||||
Paralog (21) | |||||||||
Structured_description | Concise_description | gpa-11 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases; it is expressed in ADL and ASH amphid neurons. | Curator_confirmed | WBPerson48 | |||||
WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Involved in determination of adult lifespan and serotonin receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Expressed in SMD and chemosensory neurons. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C16A11.1a | |||||||
C16A11.1b | |||||||||
Corresponding_transcript | C16A11.1a.1 | ||||||||
C16A11.1a.2 | |||||||||
C16A11.1b.1 | |||||||||
Other_sequence | MI09042 | ||||||||
Tcir_isotig14875 | |||||||||
Tcol_isotig14696 | |||||||||
FE910760.1 | |||||||||
ASC32815_1 | |||||||||
MCC04601_1 | |||||||||
JI217112.1 | |||||||||
Oden_isotig23660 | |||||||||
JI211845.1 | |||||||||
Associated_feature | WBsf987550 | ||||||||
WBsf987551 | |||||||||
WBsf987552 | |||||||||
Experimental_info | RNAi_result | WBRNAi00040641 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010808 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1311 | ||||||||
Expr15371 | |||||||||
Expr1014536 | |||||||||
Expr1144695 | |||||||||
Expr2012182 | |||||||||
Expr2030418 | |||||||||
Drives_construct | WBCnstr00001692 | ||||||||
WBCnstr00001693 | |||||||||
WBCnstr00006579 | |||||||||
WBCnstr00006587 | |||||||||
WBCnstr00006589 | |||||||||
WBCnstr00008616 | |||||||||
WBCnstr00008617 | |||||||||
WBCnstr00017537 | |||||||||
WBCnstr00036783 | |||||||||
Construct_product | WBCnstr00001692 | ||||||||
WBCnstr00001693 | |||||||||
WBCnstr00010208 | |||||||||
WBCnstr00036783 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (74) | |||||||||
Interaction (11) | |||||||||
Map_info | Map | II | Position | -5.02732 | Error | 0.024647 | |||
Positive | Positive_clone | C16A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4377 | |||||||
5349 | |||||||||
Pseudo_map_position | |||||||||
Reference (23) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |