WormBase Tree Display for Gene: WBGene00001672
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| WBGene00001672 | SMap | S_parent | Sequence | C55H1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gpa-10 | Person_evidence | WBPerson625 | |||||
| Sequence_name | C55H1.2 | ||||||||
| Molecular_name | C55H1.2 | ||||||||
| C55H1.2.1 | |||||||||
| CE27889 | |||||||||
| Other_name | CELE_C55H1.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | gpa-10 | ||||||||
| DB_info | Database | AceView | gene | 5H334 | |||||
| WormQTL | gene | WBGene00001672 | |||||||
| WormFlux | gene | WBGene00001672 | |||||||
| NDB | locus_tag | CELE_C55H1.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001672|UniProtKB=Q9BIG4 | |||||||
| family | PTHR10218 | ||||||||
| NCBI | gene | 179075 | |||||||
| RefSeq | protein | NM_072344.3 | |||||||
| SwissProt | UniProtAcc | Q9BIG4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9BIG4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpa | ||||||||
| Allele (47) | |||||||||
| Strain | WBStrain00001770 | ||||||||
| WBStrain00028951 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (66) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | gpa-10 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases; it is expressed in ADF, ASI, ASJ, ALN, CAN, LUA, and the spermatheca. | Curator_confirmed | WBPerson48 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Involved in short-term memory. Predicted to be part of heterotrimeric G-protein complex. Expressed in neurons and spermatheca. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C55H1.2 | |||||||
| Corresponding_transcript | C55H1.2.1 | ||||||||
| Associated_feature | WBsf669081 | ||||||||
| WBsf979086 | |||||||||
| WBsf1000375 | |||||||||
| WBsf1000376 | |||||||||
| WBsf1019867 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030189 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012446 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043250 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103233 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram268 | ||||||||
| Expr1310 | |||||||||
| Expr5593 | |||||||||
| Expr1015139 | |||||||||
| Expr1147230 | |||||||||
| Expr2012181 | |||||||||
| Expr2030417 | |||||||||
| Drives_construct | WBCnstr00001691 | ||||||||
| WBCnstr00002584 | |||||||||
| WBCnstr00036784 | |||||||||
| Construct_product | WBCnstr00001691 | ||||||||
| WBCnstr00010207 | |||||||||
| WBCnstr00016195 | |||||||||
| WBCnstr00036784 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction | WBInteraction000181089 | ||||||||
| WBInteraction000325682 | |||||||||
| WBInteraction000350569 | |||||||||
| WBInteraction000418802 | |||||||||
| Map_info | Map | V | Position | 0.351428 | Error | 0.019523 | |||
| Positive | Positive_clone | C55H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4376 | |||||||
| 4690 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002880 | ||||||||
| WBPaper00003465 | |||||||||
| WBPaper00004366 | |||||||||
| WBPaper00005810 | |||||||||
| WBPaper00006103 | |||||||||
| WBPaper00006194 | |||||||||
| WBPaper00024393 | |||||||||
| WBPaper00028950 | |||||||||
| WBPaper00029015 | |||||||||
| WBPaper00029025 | |||||||||
| WBPaper00031936 | |||||||||
| WBPaper00033037 | |||||||||
| WBPaper00043908 | |||||||||
| WBPaper00048988 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
