WormBase Tree Display for Gene: WBGene00001666
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| WBGene00001666 | SMap | S_parent | Sequence | T07A9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gpa-4 | Person_evidence | WBPerson625 | |||||
| Sequence_name | T07A9.7 | ||||||||
| Molecular_name | T07A9.7 | ||||||||
| T07A9.7.1 | |||||||||
| CE31599 | |||||||||
| Other_name | CELE_T07A9.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | gpa-4 | ||||||||
| DB_info | Database | AceView | gene | 4B157 | |||||
| WormQTL | gene | WBGene00001666 | |||||||
| WormFlux | gene | WBGene00001666 | |||||||
| NDB | locus_tag | CELE_T07A9.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001666|UniProtKB=Q9BIG5 | |||||||
| family | PTHR10218 | ||||||||
| NCBI | gene | 176865 | |||||||
| RefSeq | protein | NM_067520.9 | |||||||
| SwissProt | UniProtAcc | Q9BIG5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9BIG5 | |||||||
| OMIM | gene | 139330 | |||||||
| 139340 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpa | ||||||||
| Allele (75) | |||||||||
| Strain | WBStrain00024184 | ||||||||
| WBStrain00024185 | |||||||||
| WBStrain00028935 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Contained_in_operon | CEOP4020 | ||||||||
| Ortholog (78) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Concise_description | gpa-4 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases; it is expressed in ASI. | Curator_confirmed | WBPerson48 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable G protein-coupled receptor binding activity; G-protein beta/gamma-subunit complex binding activity; and GTPase activity. Predicted to be involved in adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Located in non-motile cilium. Expressed in several structures, including P lineage cell; body wall musculature; neurons; somatic gonad; and vulval precursor cell. Human ortholog(s) of this gene implicated in achromatopsia 4; congenital stationary night blindness 1G; and congenital stationary night blindness autosomal dominant 3. Is an ortholog of human GNAI1 (G protein subunit alpha i1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110714 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4393) | ||||
| DOID:13399 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4394) | ||||||
| DOID:0110715 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4393) | ||||||
| DOID:0110010 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4394) | ||||||
| DOID:8499 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4393) | ||||||
| Molecular_info | Corresponding_CDS | T07A9.7 | |||||||
| Corresponding_CDS_history | T07A9.7:wp82 | ||||||||
| Corresponding_transcript | T07A9.7.1 | ||||||||
| Other_sequence | Dviv_isotig21697 | ||||||||
| MA01440 | |||||||||
| JI459694.1 | |||||||||
| FG581161.1 | |||||||||
| ES743786.1 | |||||||||
| HBC18245_1 | |||||||||
| FG350092.1 | |||||||||
| MIC06760_1 | |||||||||
| MAC00743_1 | |||||||||
| Associated_feature | WBsf659817 | ||||||||
| WBsf659876 | |||||||||
| WBsf227841 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00094896 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035287 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052707 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018334 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1305 | ||||||||
| Expr15538 | |||||||||
| Expr1020605 | |||||||||
| Expr1156317 | |||||||||
| Expr2012193 | |||||||||
| Expr2030429 | |||||||||
| Drives_construct (23) | |||||||||
| Construct_product | WBCnstr00001686 | ||||||||
| WBCnstr00010201 | |||||||||
| WBCnstr00036790 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (45) | |||||||||
| Map_info | Map | IV | Position | -26.2029 | Error | 0.019408 | |||
| Positive | Positive_clone | T07A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4370 | |||||||
| 4454 | |||||||||
| 4691 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (19) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
