WormBase Tree Display for Gene: WBGene00001642
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| WBGene00001642 | SMap | S_parent | Sequence | T15D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gly-17 | Person_evidence | WBPerson228 | |||||
| Sequence_name | T15D6.3 | ||||||||
| Molecular_name | T15D6.3 | ||||||||
| T15D6.3.1 | |||||||||
| CE30565 | |||||||||
| Other_name | CELE_T15D6.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | gly-17 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gly | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00027028 | ||||||||
| 00027029 | |||||||||
| 00027030 | |||||||||
| 00027031 | |||||||||
| 00027032 | |||||||||
| 00027033 | |||||||||
| 00109183 | |||||||||
| 00109184 | |||||||||
| Ortholog (62) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Concise_description | gly-17 encodes a protein similar to 2/I N-acetylglucosaminyltransferase. | Paper_evidence | WBPaper00005030 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable glycosyltransferase activity. Predicted to be located in Golgi membrane. Human ortholog(s) of this gene implicated in cataract 13 with adult i phenotype. Is an ortholog of several human genes including GCNT1 (glucosaminyl (N-acetyl) transferase 1); GCNT3 (glucosaminyl (N-acetyl) transferase 3, mucin type); and GCNT4 (glucosaminyl (N-acetyl) transferase 4). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110242 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4204) | ||||
| DOID:83 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4204) | ||||||
| Molecular_info | Corresponding_CDS | T15D6.3 | |||||||
| Corresponding_CDS_history | T15D6.3:wp77 | ||||||||
| Corresponding_transcript | T15D6.3.1 | ||||||||
| Other_sequence | JO468892.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00053379 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004217 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1785 | ||||||||
| Expr1011999 | |||||||||
| Expr1156957 | |||||||||
| Drives_construct | WBCnstr00010442 | ||||||||
| WBCnstr00036804 | |||||||||
| Construct_product | WBCnstr00036804 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (30) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | I | Position | 13.1652 | Error | 0.001244 | |||
| Positive | Positive_clone | T15D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005030 | ||||||||
| WBPaper00029024 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
