WormBase Tree Display for Gene: WBGene00001565
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| WBGene00001565 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C14B9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | gei-8 | Person_evidence | WBPerson1796 | |||||
| Sequence_name | C14B9.6 | ||||||||
| Molecular_name | C14B9.6a | ||||||||
| C14B9.6a.1 | |||||||||
| CE42991 | |||||||||
| C14B9.6c | |||||||||
| CE48463 | |||||||||
| C14B9.6c.1 | |||||||||
| Other_name | pqn-12 | ||||||||
| CELE_C14B9.6 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | gei-8 | ||||||||
| DB_info | Database | AceView | gene | 3J202 | |||||
| WormQTL | gene | WBGene00001565 | |||||||
| WormFlux | gene | WBGene00001565 | |||||||
| NDB | locus_tag | CELE_C14B9.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001565|UniProtKB=P34333 | |||||||
| family | PTHR13992 | ||||||||
| NCBI | gene | 176145 | |||||||
| RefSeq | protein | NM_171207.9 | |||||||
| NM_066372.8 | |||||||||
| SwissProt | UniProtAcc | P34333 | |||||||
| UniProt_GCRP | UniProtAcc | P34333 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gei | ||||||||
| Allele (118) | |||||||||
| Strain | WBStrain00036421 | ||||||||
| WBStrain00036659 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00041711 | ||||||||
| 00041712 | |||||||||
| 00041713 | |||||||||
| 00041714 | |||||||||
| 00041715 | |||||||||
| 00041716 | |||||||||
| 00041717 | |||||||||
| Ortholog (23) | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:12858 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7672) | ||||
| Molecular_info | Corresponding_CDS | C14B9.6a | |||||||
| C14B9.6c | |||||||||
| Corresponding_CDS_history | C14B9.6a:wp126 | ||||||||
| C14B9.6a:wp194 | |||||||||
| C14B9.6b:wp126 | |||||||||
| C14B9.6b:wp194 | |||||||||
| C14B9.6b:wp238 | |||||||||
| C14B9.6c:wp126 | |||||||||
| C14B9.6c:wp194 | |||||||||
| C14B9.6c:wp238 | |||||||||
| Corresponding_transcript | C14B9.6a.1 | ||||||||
| C14B9.6c.1 | |||||||||
| Other_sequence | CJC01035_1 | ||||||||
| Oden_isotig08996 | |||||||||
| Associated_feature | WBsf667130 | ||||||||
| WBsf667131 | |||||||||
| WBsf667132 | |||||||||
| WBsf667133 | |||||||||
| WBsf717939 | |||||||||
| WBsf993243 | |||||||||
| WBsf993244 | |||||||||
| WBsf1015359 | |||||||||
| WBsf227081 | |||||||||
| Transcription_factor | WBTranscriptionFactor000765 | ||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr10782 | ||||||||
| Expr10783 | |||||||||
| Expr10784 | |||||||||
| Expr10785 | |||||||||
| Expr1021058 | |||||||||
| Expr1030935 | |||||||||
| Expr1144572 | |||||||||
| Expr2012017 | |||||||||
| Expr2030253 | |||||||||
| Drives_construct | WBCnstr00017732 | ||||||||
| WBCnstr00017733 | |||||||||
| WBCnstr00017734 | |||||||||
| WBCnstr00036857 | |||||||||
| Construct_product | WBCnstr00016611 | ||||||||
| WBCnstr00021812 | |||||||||
| WBCnstr00036857 | |||||||||
| Regulate_expr_cluster | WBPaper00042128:gei-8(ok1671)_downregulated | ||||||||
| WBPaper00042128:gei-8(ok1671)_upregulated | |||||||||
| Microarray_results (37) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction (34) | |||||||||
| Map_info | Map | III | Position | -0.376759 | Error | 0.000149 | |||
| Positive | Positive_clone | C14B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Sequence connection from [Qadota H, Kaibuchi K] | ||||||||
| The pqn-12 gene was merged into this gene following advice from [Hodgkin J]. gei-8 was previously attached to C14B9.5 but this sequence was then merged into C14B9.6 to create a splice variant and this change has led to the two gene names being merged. [020621 krb] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
