WormBase Tree Display for Gene: WBGene00001565
expand all nodes | collapse all nodes | view schema
WBGene00001565 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C14B9 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | gei-8 | Person_evidence | WBPerson1796 | |||||
Sequence_name | C14B9.6 | ||||||||
Molecular_name | C14B9.6a | ||||||||
C14B9.6a.1 | |||||||||
CE42991 | |||||||||
C14B9.6c | |||||||||
CE48463 | |||||||||
C14B9.6c.1 | |||||||||
Other_name | pqn-12 | ||||||||
CELE_C14B9.6 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | gei-8 | ||||||||
DB_info | Database | AceView | gene | 3J202 | |||||
WormQTL | gene | WBGene00001565 | |||||||
WormFlux | gene | WBGene00001565 | |||||||
NDB | locus_tag | CELE_C14B9.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001565|UniProtKB=P34333 | |||||||
family | PTHR13992 | ||||||||
NCBI | gene | 176145 | |||||||
RefSeq | protein | NM_171207.9 | |||||||
NM_066372.8 | |||||||||
SwissProt | UniProtAcc | P34333 | |||||||
UniProt_GCRP | UniProtAcc | P34333 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gei | ||||||||
Allele (118) | |||||||||
Strain | WBStrain00036421 | ||||||||
WBStrain00036659 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00041711 | ||||||||
00041712 | |||||||||
00041713 | |||||||||
00041714 | |||||||||
00041715 | |||||||||
00041716 | |||||||||
00041717 | |||||||||
Ortholog (23) | |||||||||
Structured_description | Concise_description | gei-8 encodes a novel protein highly similar to C. briggsae BP:CBP04038 that contains a glutamine/asparagine (Q/N)-rich ('prion') domain (by the algorithm of Michelitsch and Weissman) and two myb-like DNA-binding domains; interacts with GEX-3 in yeast two-hybrid assays. | Paper_evidence | WBPaper00005068 | |||||
WBPaper00005194 | |||||||||
WBPaper00012788 | |||||||||
WBPaper00012830 | |||||||||
WBPaper00012882 | |||||||||
WBPaper00012897 | |||||||||
WBPaper00013003 | |||||||||
Curator_confirmed | WBPerson48 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in several structures, including anal depressor muscle; egg-laying apparatus; germ line; somatic nervous system; and tail ganglion. Human ortholog(s) of this gene implicated in Huntington's disease. Is an ortholog of human NCOR1 (nuclear receptor corepressor 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:12858 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7672) | ||||
Molecular_info | Corresponding_CDS | C14B9.6a | |||||||
C14B9.6c | |||||||||
Corresponding_CDS_history | C14B9.6a:wp126 | ||||||||
C14B9.6a:wp194 | |||||||||
C14B9.6b:wp126 | |||||||||
C14B9.6b:wp194 | |||||||||
C14B9.6b:wp238 | |||||||||
C14B9.6c:wp126 | |||||||||
C14B9.6c:wp194 | |||||||||
C14B9.6c:wp238 | |||||||||
Corresponding_transcript | C14B9.6a.1 | ||||||||
C14B9.6c.1 | |||||||||
Other_sequence | CJC01035_1 | ||||||||
Oden_isotig08996 | |||||||||
Associated_feature | WBsf667130 | ||||||||
WBsf667131 | |||||||||
WBsf667132 | |||||||||
WBsf667133 | |||||||||
WBsf717939 | |||||||||
WBsf993243 | |||||||||
WBsf993244 | |||||||||
WBsf1015359 | |||||||||
WBsf227081 | |||||||||
Transcription_factor | WBTranscriptionFactor000765 | ||||||||
Experimental_info | RNAi_result (15) | ||||||||
Expr_pattern | Expr10782 | ||||||||
Expr10783 | |||||||||
Expr10784 | |||||||||
Expr10785 | |||||||||
Expr1021058 | |||||||||
Expr1030935 | |||||||||
Expr1144572 | |||||||||
Expr2012017 | |||||||||
Expr2030253 | |||||||||
Drives_construct | WBCnstr00017732 | ||||||||
WBCnstr00017733 | |||||||||
WBCnstr00017734 | |||||||||
WBCnstr00036857 | |||||||||
Construct_product | WBCnstr00016611 | ||||||||
WBCnstr00021812 | |||||||||
WBCnstr00036857 | |||||||||
Regulate_expr_cluster | WBPaper00042128:gei-8(ok1671)_downregulated | ||||||||
WBPaper00042128:gei-8(ok1671)_upregulated | |||||||||
Microarray_results (37) | |||||||||
Expression_cluster (125) | |||||||||
Interaction (34) | |||||||||
Map_info | Map | III | Position | -0.376759 | Error | 0.000149 | |||
Positive | Positive_clone | C14B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark (3) | |||||||||
Method | Gene |