WormBase Tree Display for Gene: WBGene00001498
expand all nodes | collapse all nodes | view schema
WBGene00001498 | SMap | S_parent | Sequence | F22B5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | fars-3 | Person_evidence | WBPerson36 | |||
WBPerson10953 | |||||||
Sequence_name | F22B5.9 | ||||||
Molecular_name | F22B5.9 | ||||||
F22B5.9.1 | |||||||
CE20708 | |||||||
Other_name | frs-2 | ||||||
CELE_F22B5.9 | Accession_evidence | NDB | BX284602 | ||||
Public_name | fars-3 | ||||||
DB_info | Database (13) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fars | ||||||
Allele (29) | |||||||
Strain | WBStrain00036948 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (23) | |||||||
Contained_in_operon | CEOP2348 | ||||||
Ortholog (42) | |||||||
Paralog | WBGene00021828 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable magnesium ion binding activity. Predicted to contribute to phenylalanine-tRNA ligase activity. Predicted to be involved in phenylalanyl-tRNA aminoacylation. Predicted to be located in cytoplasm. Predicted to be part of phenylalanine-tRNA ligase complex. Is an ortholog of human FARSB (phenylalanyl-tRNA synthetase subunit beta). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | EFO:MONDO:0100214 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17800) | ||
Molecular_info | Corresponding_CDS | F22B5.9 | |||||
Corresponding_transcript | F22B5.9.1 | ||||||
Other_sequence (52) | |||||||
Associated_feature | WBsf644470 | ||||||
WBsf221747 | |||||||
Experimental_info | RNAi_result | WBRNAi00096893 | Inferred_automatically | RNAi_primary | |||
WBRNAi00045283 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00064949 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00008684 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00096954 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095577 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00064366 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00093117 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00025176 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1022536 | ||||||
Expr1030899 | |||||||
Expr1149213 | |||||||
Expr2011432 | |||||||
Expr2029670 | |||||||
Drives_construct | WBCnstr00037973 | ||||||
Construct_product | WBCnstr00037973 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (113) | |||||||
Interaction (150) | |||||||
Map_info | Map | II | Position | 0.812692 | Error | 0.000377 | |
Positive | Positive_clone | F22B5 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00049828 | |||||||
WBPaper00055090 | |||||||
WBPaper00063340 | |||||||
Remark | dl1 : probably cytoplasmic | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |