WormBase Tree Display for Gene: WBGene00001498

WBGene00001498 SMap: S_parent: Sequence: F22B5
  Identity: Version: 2
    Name: CGC_name: fars-3 Person_evidence: WBPerson36
            WBPerson10953
      Sequence_name: F22B5.9
      Molecular_name: F22B5.9
        F22B5.9.1
        CE20708
      Other_name: frs-2
        CELE_F22B5.9 Accession_evidence: NDB BX284602
      Public_name: fars-3
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 29 Jan 2010 14:16:16 WBPerson2970 Name_change: CGC_name: fars-3
                Other_name: frs-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fars
    Allele (29)
    Strain: WBStrain00036948
    RNASeq_FPKM (74)
    GO_annotation (23)
    Contained_in_operon: CEOP2348
    Ortholog: WBGene00053891 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00023990 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            WormBase-Compara
      WBGene00163385 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00156439 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00112170 Pristionchus pacificus From_analysis: OMA
            WormBase-Compara
      WBGene00141391 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00234209 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g12373 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1106 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6145 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g6608 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10278 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21865 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16787 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12526 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11622 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4853 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12827 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00366.g9823 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00366.g9824 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-fars-3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14145 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21312 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21316 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21319 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00161.g5969 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08679 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_004979 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02366 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15203 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20133500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5251 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00119906 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00247923 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00259411 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00285226 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000004050 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0039175 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-021206-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:17800 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1346035 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1303210 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00021828 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable magnesium ion binding activity. Predicted to contribute to phenylalanine-tRNA ligase activity. Predicted to be involved in phenylalanyl-tRNA aminoacylation. Predicted to be located in cytoplasm. Predicted to be part of phenylalanine-tRNA ligase complex. Is an ortholog of human FARSB (phenylalanyl-tRNA synthetase subunit beta). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: EFO:MONDO:0100214 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:17800)
  Molecular_info: Corresponding_CDS: F22B5.9
    Corresponding_transcript: F22B5.9.1
    Other_sequence (52)
    Associated_feature: WBsf644470
      WBsf221747
  Experimental_info: RNAi_result: WBRNAi00096893 Inferred_automatically: RNAi_primary
      WBRNAi00045283 Inferred_automatically: RNAi_primary
      WBRNAi00064949 Inferred_automatically: RNAi_primary
      WBRNAi00008684 Inferred_automatically: RNAi_primary
      WBRNAi00096954 Inferred_automatically: RNAi_primary
      WBRNAi00095577 Inferred_automatically: RNAi_primary
      WBRNAi00064366 Inferred_automatically: RNAi_primary
      WBRNAi00093117 Inferred_automatically: RNAi_primary
      WBRNAi00025176 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022536
      Expr1030899
      Expr1149213
      Expr2011432
      Expr2029670
    Drives_construct: WBCnstr00037973
    Construct_product: WBCnstr00037973
    Microarray_results (20)
    Expression_cluster (113)
    Interaction (150)
  Map_info: Map: II Position: 0.812692 Error: 0.000377
    Positive: Positive_clone: F22B5 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00063340
  Remark: dl1 : probably cytoplasmic
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene