WormBase Tree Display for Gene: WBGene00001461
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WBGene00001461 | Evidence | Paper_evidence | WBPaper00003915 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_X | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | flp-18 | Person_evidence | WBPerson369 | |||||
Sequence_name | Y48D7A.2 | ||||||||
Molecular_name | Y48D7A.2 | ||||||||
Y48D7A.2.1 | |||||||||
CE33736 | |||||||||
Y48D7A.2.2 | |||||||||
Other_name | CELE_Y48D7A.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | flp-18 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00001461 | |||||
WormFlux | gene | WBGene00001461 | |||||||
NDB | locus_tag | CELE_Y48D7A.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001461|UniProtKB=Q9N4V0 | |||||||
family | PTHR20986 | ||||||||
NCBI | gene | 180587 | |||||||
RefSeq | protein | NM_076113.9 | |||||||
SwissProt | UniProtAcc | Q9N4V0 | |||||||
TREEFAM | TREEFAM_ID | TF316891 | |||||||
UniProt_GCRP | UniProtAcc | Q9N4V0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | flp | ||||||||
Allele (105) | |||||||||
Strain | WBStrain00037034 | ||||||||
WBStrain00000308 | |||||||||
WBStrain00000326 | |||||||||
WBStrain00055083 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (17) | |||||||||
Ortholog (13) | |||||||||
Paralog (3) | |||||||||
Structured_description | Concise_description | flp-18 encodes the only FMRFamide-related neuropeptide (FaRP) encoded by the C. elegans genome, other than flp-21, that activates the solitary (215V) form of NPR-1 in Xenopus oocytes; in addition, FLP-18 can activated the social (215F) form of NPR-1 in pharyngeal assays; FLP-18 is expressed in the interneurons AVA, AIY and RIG, the motor neuron RIM and the pharyngeal neurons M2 and M3. | Paper_evidence | WBPaper00004860 | |||||
WBPaper00006174 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable neuropeptide Y receptor binding activity. Involved in neuropeptide signaling pathway; regulation of muscle contraction; and sleep. Predicted to be located in extracellular space. Expressed in coelomocyte; head; neurons; tail; and in male. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y48D7A.2 | |||||||
Corresponding_CDS_history | Y48D7A.2a:wp142 | ||||||||
Y48D7A.2b:wp142 | |||||||||
Corresponding_transcript | Y48D7A.2.1 | ||||||||
Y48D7A.2.2 | |||||||||
Other_sequence (38) | |||||||||
Associated_feature | WBsf653798 | ||||||||
WBsf670006 | |||||||||
WBsf1004503 | |||||||||
Experimental_info | RNAi_result | WBRNAi00002229 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056908 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020750 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (15) | |||||||||
Drives_construct (43) | |||||||||
Construct_product | WBCnstr00017854 | ||||||||
WBCnstr00020231 | |||||||||
WBCnstr00042762 | |||||||||
Antibody | WBAntibody00000611 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (221) | |||||||||
Interaction (12) | |||||||||
Map_info | Map | X | Position | -12.6545 | Error | 0.000874 | |||
Positive | Positive_clone | Y48D7A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (52) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |