WormBase Tree Display for Gene: WBGene00001459
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| WBGene00001459 | Evidence | Paper_evidence | WBPaper00003915 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F15D4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | flp-16 | Person_evidence | WBPerson369 | |||||
| Sequence_name | F15D4.8 | ||||||||
| Molecular_name | F15D4.8 | ||||||||
| F15D4.8.1 | |||||||||
| CE34815 | |||||||||
| Other_name | CELE_F15D4.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | flp-16 | ||||||||
| DB_info | Database | AceView | gene | 2N527 | |||||
| WormQTL | gene | WBGene00001459 | |||||||
| WormFlux | gene | WBGene00001459 | |||||||
| NDB | locus_tag | CELE_F15D4.8 | |||||||
| NCBI | gene | 174967 | |||||||
| RefSeq | protein | NM_001393218.1 | |||||||
| SwissProt | UniProtAcc | Q7YX32 | |||||||
| TREEFAM | TREEFAM_ID | TF319911 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YX32 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | flp | ||||||||
| Allele (73) | |||||||||
| Strain | WBStrain00032954 | ||||||||
| WBStrain00055096 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082792 | ||||||||
| 00082793 | |||||||||
| 00082794 | |||||||||
| 00082795 | |||||||||
| 00082796 | |||||||||
| 00082797 | |||||||||
| 00082798 | |||||||||
| 00082799 | |||||||||
| 00082800 | |||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00001447 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Concise_description | flp-16 encodes a predicted FMRFamide-like peptide neurotransmitter that inhibits action potentials in the pharyngeal muscle when applied to the pharynx of dissected worms. | Paper_evidence | WBPaper00004931 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in cellular response to carbon dioxide; negative regulation of pharyngeal pumping; and negative regulation of striated muscle contraction. Predicted to be located in extracellular region. Expressed in nerve ring. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F15D4.8 | |||||||
| Corresponding_transcript | F15D4.8.1 | ||||||||
| Other_sequence (48) | |||||||||
| Associated_feature | WBsf990361 | ||||||||
| WBsf990362 | |||||||||
| WBsf990363 | |||||||||
| WBsf990364 | |||||||||
| WBsf1013590 | |||||||||
| WBsf222347 | |||||||||
| WBsf222348 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013367 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr2381 | ||||||||
| Expr1017861 | |||||||||
| Expr1030874 | |||||||||
| Expr1148694 | |||||||||
| Expr2011827 | |||||||||
| Expr2030065 | |||||||||
| Antibody | WBAntibody00000611 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (225) | |||||||||
| Map_info | Map | II | Position | 16.091 | Error | 0.073448 | |||
| Positive | Positive_clone | F15D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003915 | ||||||||
| WBPaper00004257 | |||||||||
| WBPaper00004931 | |||||||||
| WBPaper00006011 | |||||||||
| WBPaper00024196 | |||||||||
| WBPaper00024457 | |||||||||
| WBPaper00026655 | |||||||||
| WBPaper00026832 | |||||||||
| WBPaper00026994 | |||||||||
| WBPaper00043908 | |||||||||
| WBPaper00055865 | |||||||||
| WBPaper00065946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
