WormBase Tree Display for Gene: WBGene00001448
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| WBGene00001448 | SMap | S_parent | Sequence | C03G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | flp-5 | Person_evidence | WBPerson369 | |||||
| Sequence_name | C03G5.7 | ||||||||
| Molecular_name | C03G5.7 | ||||||||
| C03G5.7.1 | |||||||||
| CE48316 | |||||||||
| C03G5.7.2 | |||||||||
| Other_name | CELE_C03G5.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | flp-5 | ||||||||
| DB_info | Database | AceView | gene | XJ149 | |||||
| WormQTL | gene | WBGene00001448 | |||||||
| WormFlux | gene | WBGene00001448 | |||||||
| NDB | locus_tag | CELE_C03G5.7 | |||||||
| NCBI | gene | 181104 | |||||||
| RefSeq | protein | NM_001381040.1 | |||||||
| SwissProt | UniProtAcc | O61466 | |||||||
| TREEFAM | TREEFAM_ID | TF321395 | |||||||
| UniProt_GCRP | UniProtAcc | O61466 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | flp | ||||||||
| Allele (62) | |||||||||
| Strain | WBStrain00029161 | ||||||||
| WBStrain00002022 | |||||||||
| WBStrain00037763 | |||||||||
| WBStrain00055138 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036027 | ||||||||
| 00036028 | |||||||||
| 00036029 | |||||||||
| 00036030 | |||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00010575 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Concise_description | flp-5 encodes a predicted FMRFamide-like peptide neurotransmitter that increases action potential frequency in the pharyngeal muscle when applied to the pharynx of dissected worms; expressed in the sensory neurons ASE and PVM. | Paper_evidence | WBPaper00003889 | |||||
| WBPaper00004931 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in neuropeptide signaling pathway. Predicted to be located in extracellular region. Expressed in head; neurons; and pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C03G5.7 | |||||||
| Corresponding_CDS_history | C03G5.7:wp236 | ||||||||
| Corresponding_transcript | C03G5.7.1 | ||||||||
| C03G5.7.2 | |||||||||
| Other_sequence | CJC04122_1 | ||||||||
| Oden_isotig25265 | |||||||||
| CRC08365_1 | |||||||||
| Hbac_isotig03961 | |||||||||
| CR05029 | |||||||||
| FD514102.1 | |||||||||
| CBC08035_1 | |||||||||
| CSC00783_1 | |||||||||
| Associated_feature | WBsf648371 | ||||||||
| WBsf1006180 | |||||||||
| WBsf1023429 | |||||||||
| WBsf236056 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010061 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001366 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039535 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00002805 | ||||||||
| WBCnstr00005119 | |||||||||
| WBCnstr00005130 | |||||||||
| WBCnstr00005133 | |||||||||
| WBCnstr00010911 | |||||||||
| WBCnstr00036939 | |||||||||
| Construct_product | WBCnstr00036939 | ||||||||
| Antibody | WBAntibody00000611 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (285) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | X | Position | 0.097994 | Error | 0.001997 | |||
| Positive | Positive_clone | C03G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002755 | ||||||||
| WBPaper00003915 | |||||||||
| WBPaper00004257 | |||||||||
| WBPaper00004931 | |||||||||
| WBPaper00006011 | |||||||||
| WBPaper00006506 | |||||||||
| WBPaper00010904 | |||||||||
| WBPaper00019150 | |||||||||
| WBPaper00022586 | |||||||||
| WBPaper00023309 | |||||||||
| WBPaper00023581 | |||||||||
| WBPaper00024196 | |||||||||
| WBPaper00024457 | |||||||||
| WBPaper00025141 | |||||||||
| WBPaper00026655 | |||||||||
| WBPaper00026832 | |||||||||
| WBPaper00026994 | |||||||||
| WBPaper00028988 | |||||||||
| WBPaper00030763 | |||||||||
| WBPaper00039673 | |||||||||
| WBPaper00046084 | |||||||||
| WBPaper00055865 | |||||||||
| WBPaper00065387 | |||||||||
| WBPaper00065946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
