WormBase Tree Display for Gene: WBGene00001390
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| WBGene00001390 | Evidence | Paper_evidence | WBPaper00005754 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | W02A2 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | far-6 | |||||||
| Sequence_name | W02A2.2 | ||||||||
| Molecular_name | W02A2.2 | ||||||||
| W02A2.2.1 | |||||||||
| CE21232 | |||||||||
| Other_name | CELE_W02A2.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | far-6 | ||||||||
| DB_info | Database | AceView | gene | 4O91 | |||||
| WormQTL | gene | WBGene00001390 | |||||||
| WormFlux | gene | WBGene00001390 | |||||||
| NDB | locus_tag | CELE_W02A2.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001390|UniProtKB=Q9XUB7 | |||||||
| family | PTHR31418 | ||||||||
| NCBI | gene | 189096 | |||||||
| RefSeq | protein | NM_070160.6 | |||||||
| TREEFAM | TREEFAM_ID | TF316252 | |||||||
| TrEMBL | UniProtAcc | Q9XUB7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUB7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info (9) | |||||||||
| Molecular_info | Corresponding_CDS | W02A2.2 | |||||||
| Corresponding_transcript | W02A2.2.1 | ||||||||
| Associated_feature | WBsf229420 | ||||||||
| WBsf229421 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019478 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036163 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054544 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1563 | ||||||||
| Expr2396 | |||||||||
| Expr6816 | |||||||||
| Expr1013467 | |||||||||
| Expr1158090 | |||||||||
| Expr2011425 | |||||||||
| Expr2029663 | |||||||||
| Drives_construct | WBCnstr00002733 | ||||||||
| WBCnstr00036978 | |||||||||
| Construct_product | WBCnstr00036978 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (211) | |||||||||
| Interaction (209) | |||||||||
| WBProcess | WBbiopr:00000121 | ||||||||
| Map_info | Map | IV | Position | 8.53099 | Error | 0.001148 | |||
| Positive | Positive_clone | W02A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005754 | ||||||||
| WBPaper00065716 | |||||||||
| Remark | [Jan Bradley] We have tested fatty acid and retinol binding of 3 of far-1 to far-6; all are expressed and we have assumed the others are able to bind fatty acids based on sequence similarity. There is a slight problem with the gene finder/genome sequence of F15B9.3 as it predicts the far-5 gene to be continuous with the c terminal of a lag-2 gene. We've tried v hard to see if the whole lag 2/far gene is transcribed and it doesn't seem to be but we can find an sl-far gene transcript with specific primers for the c terminal. | ||||||||
| Sequence connection corrected to W02A2.2 from W02A9.2 following advice from [Hodgkin J], [krb 020702] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
