WormBase Tree Display for Gene: WBGene00001340

WBGene00001340 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 1
    Name: CGC_name: etr-1 Person_evidence: WBPerson261
      Sequence_name: T01D1.2
      Molecular_name (70)
      Other_name: CELE_T01D1.2 Accession_evidence: NDB BX284602
      Public_name: etr-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: etr
    Allele (130)
    Possibly_affected_by: WBVar02152955
      WBVar02152954
    Strain: WBStrain00054854
      WBStrain00054853
    RNASeq_FPKM (74)
    GO_annotation (13)
    Ortholog (43)
    Paralog (13)
    Structured_description (2)
  Disease_info: Potential_model: DOID:0070383 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2550)
  Molecular_info: Corresponding_CDS (19)
    Corresponding_CDS_history: T01D1.2b:wp182
      T01D1.2c:wp247
    Corresponding_transcript (32)
    Other_sequence: Dviv_isotig04676
      FC539270.1
      ACC32580_1
      JI482702.1
      CBC02887_1
      Dviv_isotig20044
      ACC25693_1
      HG01007
      GPC01527_1
      Name_isotig09158
      CSC00679_1
      CBC14550_1
      Dviv_isotig04671
      Hbac_isotig05922
      ACC09872_1
      JO469720.1
      ES563205.1
      MHC10922_1
      MH01597
      MHC01340_1
      JI168867.1
      Acan_isotig04167
      CGC00655_1
      ACC13691_1
      JK314792.1
      Dviv_isotig20045
      Dviv_isotig04668
      EY464257.1
      MIC08822_1
      JI170332.1
      GR14208
      FC555102.1
      Dviv_isotig04673
      EX542395.1
      TSC08679_1
      Acan_isotig04166
      MH04418
      FD515515.1
      EY466518.1
      Tcol_isotig15927
      JI473835.1
      JI211747.1
      JI168553.1
      EY473112.1
      HGC04770_1
      Dviv_isotig04675
      JI481089.1
      GRC00334_1
      FG351617.1
      EY473150.1
      Oden_isotig11716
      MH00883
      JI461675.1
      EY464230.1
      FC544048.1
      Hbac_isotig07358
      Tcir_isotig13489
    Associated_feature (19)
  Experimental_info: RNAi_result (25)
    Expr_pattern: Expr1204
      Expr9488
      Expr13464
      Expr1026122
      Expr1030819
      Expr1155747
      Expr2011378
      Expr2029614
    Drives_construct: WBCnstr00010149
      WBCnstr00036992
    Construct_product: WBCnstr00014053
      WBCnstr00036992
    Regulate_expr_cluster: WBPaper00062325:etr-1(lq61)_downregulated
      WBPaper00062325:etr-1(lq61)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062325:muscle_depleted_noncoding-RNA
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062325:muscle_enriched_noncoding-RNA
    Antibody: WBAntibody00002767
    Microarray_results (74)
    Expression_cluster (115)
    Interaction (42)
  Map_info: Map: II Position: -15.9026 Error: 0.013546
    Positive: Positive_clone: T01D1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (23)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene