WormBase Tree Display for Gene: WBGene00001237
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| WBGene00001237 | SMap | S_parent | Sequence | W03H1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | elc-2 | Person_evidence | WBPerson322 | |||||
| Sequence_name | W03H1.2 | ||||||||
| Molecular_name | W03H1.2 | ||||||||
| W03H1.2.1 | |||||||||
| CE53617 | |||||||||
| Other_name | CELE_W03H1.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | elc-2 | ||||||||
| DB_info | Database | AceView | gene | XC392 | |||||
| WormQTL | gene | WBGene00001237 | |||||||
| NDB | locus_tag | CELE_W03H1.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001237|UniProtKB=Q23153 | |||||||
| family | PTHR20648 | ||||||||
| NCBI | gene | 24104987 | |||||||
| RefSeq | protein | NM_001374969.2 | |||||||
| TREEFAM | TREEFAM_ID | TF300233 | |||||||
| TrEMBL | UniProtAcc | Q23153 | |||||||
| UniProt_GCRP | UniProtAcc | Q23153 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | elc | ||||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00077452 | ||||||||
| 00077453 | |||||||||
| 00077454 | |||||||||
| 00108494 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00001236 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00077680 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | elc-2 encodes a protein containing a Skp1 dimerisation domain that has homology to human transcription elongation factor B (SIII), polypeptide I (15kD, elonginsC). | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable protein-macromolecule adaptor activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be part of elongin complex. Expressed in ADFL and ADFR. Is an ortholog of human ELOC (elongin C). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W03H1.2 | |||||||
| Corresponding_CDS_history | W03H1.2:wp272 | ||||||||
| Corresponding_transcript | W03H1.2.1 | ||||||||
| Associated_feature | WBsf1004142 | ||||||||
| WBsf1004143 | |||||||||
| WBsf1004144 | |||||||||
| WBsf1004145 | |||||||||
| WBsf1004146 | |||||||||
| WBsf1022348 | |||||||||
| WBsf1022349 | |||||||||
| WBsf237027 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054733 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00115861 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115980 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr15109 | ||||||||
| Expr1013386 | |||||||||
| Expr1158272 | |||||||||
| Expr1200373 | |||||||||
| Expr2011272 | |||||||||
| Expr2029508 | |||||||||
| Drives_construct | WBCnstr00037021 | ||||||||
| Construct_product | WBCnstr00037021 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (52) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | X | Position | -17.5961 | Error | 0.0209 | |||
| Positive | Positive_clone | W03H1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026616 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048240 | |||||||||
| WBPaper00052463 | |||||||||
| WBPaper00052524 | |||||||||
| WBPaper00053515 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
