WormBase Tree Display for Gene: WBGene00001065

WBGene00001065 SMap: S_parent: Sequence: EGAP7
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: dpy
    Reference_allele: WBVar00142921
    Allele (27)
    Legacy_information: e27 : medium dumpy (non-roller). L1 non-dumpy. ES3 (all stages) ME1. NA > 10 (e2079 sc26 : left roller dumpy m39ts etc.).
      e182 : medium dumpy. ES3 (adult). ME1. NA1.
      [C.elegansII] e27 : medium dumpy (non-roller). L1 non-dumpy. Suppresses some alleles of glp-1, emb-5.ES3 (all stages) ME1. OA>10 : e2079, sc26 (left roller dumpy), e182 (pka dpy-12, medium dumpy, ES3 (adult), ME1), m39ts [Brenner 1974; EL]
    Strain (17)
    RNASeq_FPKM (74)
    GO_annotation: 00063404
      00063405
      00063406
      00063407
      00063408
      00063409
      00108189
    Ortholog (34)
    Paralog (163)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Used to study skin disease. Is an ortholog of human C1QTNF9 (C1q and TNF related 9); C1QTNF9B (C1q and TNF related 9B); and OTOL1 (otolin 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Experimental_model: DOID:37 Homo sapiens Paper_evidence: WBPaper00061220
          Curator_confirmed: WBPerson324
          Date_last_updated: 02 May 2022 00:00:00
  Models_disease_in_annotation: WBDOannot00001174
  Molecular_info: Corresponding_CDS: EGAP7.1
    Corresponding_transcript: EGAP7.1.1
    Other_sequence (114)
    Associated_feature (13)
  Experimental_info: RNAi_result (16)
    Expr_pattern: Chronogram1645
      Expr1012140
      Expr1030674
      Expr1147697
      Expr2011073
      Expr2029310
    Drives_construct: WBCnstr00037106
    Construct_product: WBCnstr00037106
    Microarray_results: SMD_EGAP7.1
      189723_s_at
      A_12_P108088
      Aff_EGAP7.1
      GPL13394_WBGene00001065
      GPL13914_EGAP7.1
      GPL14144_EGAP7.1_587-646_0.816_22_C
      GPL14144_EGAP7.1_625-684_0.869_15_A
      GPL14144_EGAP7.1_84-143_0.898_6_B
      GPL19516_CGZ0014262
      GPL21109_EGAP7.1
      GPL3518_CE07013
      GPL8304_CE_WBGene00001065_A
      GPL8673_EGAP7_1P00001
      GPL8673_EGAP7_1P00187
      GPL8673_EGAP7_1P00210
      GPL9450_EGAP7.1
      cea2.p.138876
    Expression_cluster (278)
    Interaction (176)
    WBProcess: WBbiopr:00000124
  Map_info: Map: X Position: -17.0217 Error: 0.010146
    Well_ordered
    Positive: Inside_rearr: mnDp52
        yDp14
        yDp16
        meDf6
      Positive_clone: EGAP7 Person_evidence: WBPerson297
          Inferred_automatically: From sequence, transcript, pseudogene data
    Negative: Outside_rearr: mnDp69
    Mapping_data: 2_point (25)
      Multi_point (51)
      Pos_neg_data (32)
    Landmark_gene
  Reference (72)
  Remark: Sequence connection from [Johnstone IL], [020809 krb]
  Method: Gene