WormBase Tree Display for Gene: WBGene00001048

WBGene00001048 SMap: S_parent: Sequence: Y71F9B
  Identity: Version: 1
    Name: CGC_name: dnj-30 Person_evidence: WBPerson625
      Sequence_name: Y71F9B.16
      Molecular_name: Y71F9B.16a
        Y71F9B.16a.1
        CE29000
        Y71F9B.16b
        CE50074
        Y71F9B.16b.1
      Other_name: CELE_Y71F9B.16 Accession_evidence: NDB BX284601
      Public_name: dnj-30
    DB_info: Database: AceView gene 1D286
        WormQTL gene WBGene00001048
        WormFlux gene WBGene00001048
        NDB locus_tag CELE_Y71F9B.16
        Panther gene CAEEL|WormBase=WBGene00001048|UniProtKB=Q95Y44
          family PTHR15606
        NCBI gene 171833
        RefSeq protein NM_058629.6
            NM_001306448.3
        TrEMBL UniProtAcc A0A078BS22
            Q95Y44
        UniProt_GCRP UniProtAcc Q95Y44
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:22 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dnj
    Allele (86)
    RNASeq_FPKM (74)
    GO_annotation: 00000514
    Contained_in_operon: CEOP1052
    Ortholog: WBGene00149443 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00083462 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00140310 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00127828 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00270403 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00227308 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g9413 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6385 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17653 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g20941 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2973 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1755 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g11862 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21300 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5246 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23491 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00043.g2358 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-dnj-30 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold627.g6853 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00881.g16416 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_002074 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12137 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g22120 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10140920 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g381 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00238150 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00117229 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00256860 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287785 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0039116 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030131-66 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:15470 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1915848 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1306024 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Concise_description: This gene encodes a protein containing a DnaJ ('J') domain. Paper_evidence: WBPaper00012768
            WBPaper00012859
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be located in nucleus. Is an ortholog of human DNAJC8 (DnaJ heat shock protein family (Hsp40) member C8). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y71F9B.16a
      Y71F9B.16b
    Corresponding_transcript: Y71F9B.16a.1
      Y71F9B.16b.1
    Other_sequence (44)
    Associated_feature: WBsf982957
      WBsf1009390
      WBsf219057
  Experimental_info: RNAi_result: WBRNAi00058178 Inferred_automatically: RNAi_primary
      WBRNAi00004810 Inferred_automatically: RNAi_primary
      WBRNAi00116818 Inferred_automatically: RNAi_primary
      WBRNAi00106345 Inferred_automatically: RNAi_primary
      WBRNAi00083671 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028252
      Expr1030660
      Expr1161597
      Expr2011006
      Expr2029244
    Microarray_results (19)
    Expression_cluster (95)
    Interaction (82)
  Map_info: Map: I Position: -7.31296 Error: 0.004942
    Positive: Positive_clone: Y71F9B Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene