WormBase Tree Display for Gene: WBGene00000988
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| WBGene00000988 | SMap | S_parent | Sequence | F09E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dhs-25 | Person_evidence | WBPerson651 | |||||
| Sequence_name | F09E10.3 | ||||||||
| Molecular_name | F09E10.3 | ||||||||
| F09E10.3.1 | |||||||||
| CE30939 | |||||||||
| Other_name | CELE_F09E10.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | dhs-25 | ||||||||
| DB_info | Database | AceView | gene | XC107 | |||||
| WormQTL | gene | WBGene00000988 | |||||||
| WormFlux | gene | WBGene00000988 | |||||||
| NDB | locus_tag | CELE_F09E10.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000988|UniProtKB=Q19246 | |||||||
| family | PTHR42760 | ||||||||
| NCBI | gene | 180486 | |||||||
| RefSeq | protein | NM_075881.7 | |||||||
| TREEFAM | TREEFAM_ID | TF313099 | |||||||
| TrEMBL | UniProtAcc | Q19246 | |||||||
| UniProt_GCRP | UniProtAcc | Q19246 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dhs | ||||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00064025 | ||||||||
| 00064026 | |||||||||
| 00064027 | |||||||||
| 00064028 | |||||||||
| Ortholog (37) | |||||||||
| Paralog (38) | |||||||||
| Structured_description | Concise_description | dhs-25 encodes a short-chain dehydrogenase predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Is an ortholog of human HSD17B8 (hydroxysteroid 17-beta dehydrogenase 8). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F09E10.3 | |||||||
| Corresponding_transcript | F09E10.3.1 | ||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf647828 | ||||||||
| WBsf978998 | |||||||||
| WBsf235335 | |||||||||
| WBsf235336 | |||||||||
| WBsf235337 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00092605 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030705 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044113 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012971 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013727 | ||||||||
| Expr1030614 | |||||||||
| Expr1148081 | |||||||||
| Expr2010909 | |||||||||
| Expr2029148 | |||||||||
| Drives_construct | WBCnstr00037156 | ||||||||
| Construct_product | WBCnstr00037156 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (297) | |||||||||
| Interaction (49) | |||||||||
| Map_info | Map | X | Position | -18.0802 | Error | 0.016986 | |||
| Positive | Positive_clone | F09E10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035185 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
