WormBase Tree Display for Gene: WBGene00000987
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WBGene00000987 | SMap | S_parent | Sequence | Y60A3A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | dhs-24 | Person_evidence | WBPerson651 | |||||
Sequence_name | Y60A3A.10 | ||||||||
Molecular_name | Y60A3A.10 | ||||||||
Y60A3A.10.1 | |||||||||
CE38457 | |||||||||
Y60A3A.10.2 | |||||||||
Other_name | CELE_Y60A3A.10 | Accession_evidence | NDB | BX284605 | |||||
Public_name | dhs-24 | ||||||||
DB_info | Database | AceView | gene | 5U406 | |||||
WormQTL | gene | WBGene00000987 | |||||||
WormFlux | gene | WBGene00000987 | |||||||
NDB | locus_tag | CELE_Y60A3A.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000987|UniProtKB=Q9U1Y6 | |||||||
family | PTHR43157 | ||||||||
NCBI | gene | 180306 | |||||||
RefSeq | protein | NM_075459.9 | |||||||
TrEMBL | UniProtAcc | Q9U1Y6 | |||||||
UniProt_GCRP | UniProtAcc | Q9U1Y6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dhs | ||||||||
Allele (251) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00098535 | ||||||||
Contained_in_operon | CEOP5542 | ||||||||
Ortholog (30) | |||||||||
Paralog (11) | |||||||||
Structured_description | Concise_description | dhs-24 encodes a member of the short-chain dehydrogenases/reductases family (SDR). | Curator_confirmed | WBPerson48 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in ABalaaaala; ABalaapaaa; and AFD based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and let-7 based on microarray; proteomic; and RNA-seq studies. Is affected by seven chemicals including rotenone; Alovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Short-chain dehydrogenase/reductase SDR; short chain dehydrogenase; and NAD(P)-binding domain superfamily. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y60A3A.10 | |||||||
Corresponding_CDS_history | Y60A3A.10:wp87 | ||||||||
Y60A3A.10:wp141 | |||||||||
Corresponding_transcript | Y60A3A.10.1 | ||||||||
Y60A3A.10.2 | |||||||||
Other_sequence (55) | |||||||||
Associated_feature | WBsf669875 | ||||||||
WBsf1003391 | |||||||||
WBsf1003392 | |||||||||
WBsf1003393 | |||||||||
WBsf1021846 | |||||||||
WBsf1021847 | |||||||||
WBsf1021848 | |||||||||
Experimental_info | RNAi_result | WBRNAi00057803 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1024694 | ||||||||
Expr1161235 | |||||||||
Expr2010908 | |||||||||
Expr2029147 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (77) | |||||||||
Interaction (22) | |||||||||
Map_info | Map | V | Position | 24.0925 | Error | 0.019177 | |||
Positive | Positive_clone | Y60A3A | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00042257 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |